contig_metadata
8 rows where analysis = "diamond", bioproject = "PRJNA415856" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 28180761 | 28180761 | PRJNA415856_P_NODE_36526_length_167_cov_0.864407_g36265_i0 | PRJNA415856 | 36526 | 167 | 0.864407 | 1.44355969 | Treponema sp. J25 | 2094121 | Bacteria | Bacteria | 66.2 | 5.3e-11 | NR | WP_132781733.1 | 2094121 | g36265 | i0 | 88.2 | 0.610778443113772 | 34 | 4 | 61.1 | 0 | 103 | 2 | 1 | 34 | WP_132781733.1 GDP-L-fucose synthase family protein [Treponema sp. J25] | diamond | 102 | 66.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. J25 | ||
| 28387024 | 28387024 | PRJNA415856_P_NODE_47766_length_163_cov_0.894737_g47505_i0 | PRJNA415856 | 47766 | 163 | 0.894737 | 1.45842131 | Bacteria | 2 | Bacteria | Bacteria | 65.5 | 1.02e-10 | NR | MDR1318682.1 | 166 | g47505 | i0 | 60.4 | 1.96932515337423 | 53 | 21 | 97.5 | 0 | 160 | 2 | 240 | 292 | MDR1318682.1 ABC transporter permease [Treponema sp.] | diamond | 321 | 65.9 | 0.993930197268589 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28623182 | 28623182 | PRJNA415856_P_NODE_26047_length_181_cov_1.810606_g25786_i0 | PRJNA415856 | 26047 | 181 | 1.810606 | 3.27719686 | Treponema sp. | 166 | Bacteria | Bacteria | 69.3 | 2.72e-12 | NR | MDD7451654.1 | 166 | g25786 | i0 | 57.7 | 0.861878453038674 | 52 | 21 | 84.5 | 1 | 2 | 154 | 180 | 231 | MDD7451654.1 hypothetical protein [Treponema sp.] | diamond | 156 | 69.3 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. | ||
| 28812159 | 28812159 | PRJNA415856_P_NODE_27248_length_179_cov_1.461538_g26987_i0 | PRJNA415856 | 27248 | 179 | 1.461538 | 2.61615302 | Treponema denticola | 158 | Bacteria | Bacteria | 120 | 1.9799999999999996e-31 | NR | WP_002669777.1 | 158 | g26987 | i0 | 94.9 | 0.988826815642458 | 59 | 3 | 98.9 | 0 | 1 | 177 | 223 | 281 | WP_002669777.1 ABC transporter permease [Treponema denticola] | diamond | 177 | 120 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 30423488 | 30423488 | PRJNA415856_P_NODE_42193_length_165_cov_0.879310_g41932_i0 | PRJNA415856 | 42193 | 165 | 0.87931 | 1.4508615 | Treponema sp. OMZ 838 | 1539298 | Bacteria | Bacteria | 42 | 0.0148 | NR | WP_044016175.1 | 1539298 | g41932 | i0 | 54.3 | 2.41818181818182 | 35 | 16 | 63.6 | 0 | 1 | 105 | 118 | 152 | WP_044016175.1 hypothetical protein [Treponema sp. OMZ 838] | diamond | 399 | 42 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 838 | ||
| 31261326 | 31261326 | PRJNA415856_P_NODE_30275_length_174_cov_1.400000_g30014_i0 | PRJNA415856 | 30275 | 174 | 1.4 | 2.436 | Spirochaetales | 136 | Bacteria | Bacteria | 112 | 4.17e-28 | NR | WP_132781559.1 | 2094121 | g30014 | i0 | 94.7 | 1.96551724137931 | 57 | 3 | 98.3 | 0 | 172 | 2 | 28 | 84 | WP_132781559.1 aspartate-semialdehyde dehydrogenase [Treponema sp. J25] | diamond | 342 | 112 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. J25 | ||
| 31466239 | 31466239 | PRJNA415856_P_NODE_46436_length_163_cov_0.894737_g46175_i0 | PRJNA415856 | 46436 | 163 | 0.894737 | 1.45842131 | Treponema sp. OMZ 9 | 166 | Bacteria | Bacteria | 61.2 | 3.53e-9 | NR | WP_253824014.1 | 2563662 | g46175 | i0 | 64.8 | 0.993865030674847 | 54 | 19 | 99.4 | 0 | 163 | 2 | 286 | 339 | WP_253824014.1 hypothetical protein [Treponema sp. OMZ 906] | diamond | 162 | 61.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. OMZ 906 | ||
| 31908891 | 31908891 | PRJNA415856_P_NODE_38117_length_166_cov_0.871795_g37856_i0 | PRJNA415856 | 38117 | 166 | 0.871795 | 1.4471797 | Spirochaetota bacterium | 2202144 | Bacteria | Bacteria | 41.2 | 0.0453 | NR | MBN2547256.1 | 2202144 | g37856 | i0 | 42.9 | 1.73493975903614 | 49 | 24 | 88.6 | 1 | 18 | 164 | 147 | 191 | MBN2547256.1 hypothetical protein [Spirochaetota bacterium] | diamond | 288 | 41.2 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetota bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;