RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA415856" and tax_clade = "Cyanobacteriota/Melainabacteria group"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Cyanobacteriota/Melainabacteria group · 4 ✖

bioproject 1

  • PRJNA415856 · 4 ✖

analysis 1

  • diamond · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27423467 27423467 PRJNA415856_P_NODE_20543_length_193_cov_1.715278_g20282_i0 PRJNA415856 20543 193 1.715278 3.31048654 Candidatus Adamsella sp. 2773935 Bacteria Bacteria 119 1.01e-30   NR HIZ28049.1 2773935 g20282 i0 96.8 0.979274611398964 63 2 97.9 0 191 3 11 73 HIZ28049.1 chemotaxis protein CheW [Candidatus Adamsella sp.] diamond 189 119 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati         Candidatus Adamsella Candidatus Adamsella sp.
30376973 30376973 PRJNA415856_P_NODE_44592_length_164_cov_0.886957_g44331_i0 PRJNA415856 44592 164 0.886957 1.45460948 Cyanobacteriota/Melainabacteria group 1798711 Bacteria Bacteria 84.3 2.46e-17   NR MBY0495602.1 2847862 g44331 i0 75.9 3.95121951219512 54 13 98.8 0 1 162 398 451 MBY0495602.1 sensor histidine kinase [Cyanobacteriota bacterium] diamond 648 84.7 0.995277449822904 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteriota bacterium
31244601 31244601 PRJNA415856_P_NODE_50015_length_162_cov_0.902655_g49754_i0 PRJNA415856 50015 162 0.902655 1.4623011 Cyanobacteria bacterium J06621_12 3023161 Bacteria Bacteria 81.6 1.34e-16   NR MEL6580192.1 3023161 g49754 i0 61.5 2.87037037037037 52 20 96.3 0 5 160 235 286 MEL6580192.1 hypothetical protein [Cyanobacteria bacterium J06621_12] diamond 465 81.6 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati Cyanobacteriota         Cyanobacteria bacterium J06621_12
32573578 32573578 PRJNA415856_P_NODE_41579_length_165_cov_0.879310_g41318_i0 PRJNA415856 41579 165 0.87931 1.4508615 Candidatus Sericytochromatia bacterium 2762020 Bacteria Bacteria 89 3.21e-19   NR MFN8575233.1 2762020 g41318 i0 77.8 0.981818181818182 54 12 98.2 0 3 164 156 209 MFN8575233.1 hypothetical protein [Candidatus Sericytochromatia bacterium] diamond 162 89 1 Bacteria Cyanobacteriota/Melainabacteria group Bacillati   Candidatus Sericytochromatia       Candidatus Sericytochromatia bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;