RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA414036" and tax_phylum = "Xenacoelomorpha"

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tax_superkingdom 1

tax_phylum 1

  • Xenacoelomorpha · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA414036 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28734436 28734436 PRJNA414036_P_NODE_20087_length_337_cov_2.377483_g18361_i0 PRJNA414036 20087 337 2.377483 8.01211771 Opisthokonta 33154 Xenacoelomorpha other_Eukaryota 64.7 2.13e-9   NR XP_063720812.1 84072 g18361 i0 65.6 16.8071216617211 64 22 57 0 331 140 307 370 XP_063720812.1 ATP synthase subunit beta, mitochondrial-like [Symsagittifera roscoffensis] diamond 5664 64.7 1 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis
31134521 31134521 PRJNA414036_P_NODE_13415_length_396_cov_5.135734_g11775_i0 PRJNA414036 13415 396 5.135734 20.33750664 Metazoa 33208 Xenacoelomorpha other_Eukaryota 100 1.9e-21   NR XP_063712641.1 84072 g11775 i0 50.7 70.5075757575758 142 47 90.2 1 37 393 391 532 XP_063712641.1 pre-mRNA-processing-splicing factor 8 [Symsagittifera roscoffensis] diamond 27921 101 0.99009900990099 Eukaryota Opisthokonta Metazoa Xenacoelomorpha   Acoela Sagittiferidae Symsagittifera Symsagittifera roscoffensis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;