RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA414036" and tax_phylum = "Chloroflexota"

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tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA414036 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27913258 27913258 PRJNA414036_P_NODE_36865_length_243_cov_19.798077_g35129_i0 PRJNA414036 36865 243 19.798077 48.10932711 FCB group 1783270 Bacteria Bacteria 75.9 4e-16   NR RZP14462.1 2026724 g35129 i0 70.4 10.9382716049383 54 16 66.7 0 162 1 6 59 RZP14462.1 MAG: hypothetical protein EVA32_02495 [Chloroflexota bacterium] diamond 2658 75.9 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
31908860 31908860 PRJNA414036_P_NODE_19897_length_338_cov_4.808581_g18172_i0 PRJNA414036 19897 338 4.808581 16.25300378 Chloroflexota bacterium 2026724 Bacteria Bacteria 57.4 7.74e-7   NR MSP12752.1 2026724 g18172 i0 71.7 3.25739644970414 46 13 40.8 0 3 140 238 283 MSP12752.1 F0F1 ATP synthase subunit beta [Chloroflexota bacterium] diamond 1101 57.4 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
32541923 32541923 PRJNA414036_P_NODE_27659_length_286_cov_75.366534_g25924_i0 PRJNA414036 27659 286 75.366534 215.54828724 Anaerolineales bacterium 2073117 Bacteria Bacteria 43.1 0.0451   NR MCU0487625.1 2073117 g25924 i0 32.1 0.555944055944056 53 36 55.6 0 168 10 270 322 MCU0487625.1 hypothetical protein [Anaerolineales bacterium] diamond 159 43.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae Anaerolineales     Anaerolineales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;