RNAquarium Metadata Server
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contig_metadata

6 rows where analysis = "diamond", bioproject = "PRJNA414036" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 6 ✖

tax_clade 1

bioproject 1

  • PRJNA414036 · 6 ✖

analysis 1

  • diamond · 6 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28086143 28086143 PRJNA414036_P_NODE_44365_length_231_cov_3.479592_g42626_i0 PRJNA414036 44365 231 3.479592 8.03785752 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 61.6 6.51e-9   NR MBC7564865.1 2026720 g42626 i0 50.7 2.76623376623377 71 19 92.2 1 9 221 133 187 MBC7564865.1 AI-2E family transporter [Candidatus Saccharibacteria bacterium] diamond 639 61.6 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29506996 29506996 PRJNA414036_P_NODE_60810_length_213_cov_3.617978_g59071_i0 PRJNA414036 60810 213 3.617978 7.70629314 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 47.8 1.8e-4   NR MDB5179975.1 2026720 g59071 i0 79.2 0.338028169014085 24 5 33.8 0 11 82 104 127 MDB5179975.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 72 47.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
29965898 29965898 PRJNA414036_P_NODE_41211_length_231_cov_5.244898_g39472_i0 PRJNA414036 41211 231 5.244898 12.11571438 Bacteria 2 Bacteria Bacteria 43.9 0.0123   NR AHB42076.1 1394711 g39472 i0 95.5 24.5714285714286 22 1 28.6 0 8 73 523 544 AHB42076.1 hypothetical protein RAAC3_TM7C00001G0211 [Candidatus Saccharibacteria bacterium RAAC3_TM7_1] diamond 5676 43.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharibacteria bacterium RAAC3_TM7_1
30455065 30455065 PRJNA414036_P_NODE_83093_length_158_cov_2.585366_g81354_i0 PRJNA414036 83093 158 2.585366 4.08487828 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 45.8 1.38e-4   NR MDB5179974.1 2026720 g81354 i0 50 0.949367088607595 50 25 94.9 0 152 3 17 66 MDB5179974.1 hypothetical protein [Candidatus Saccharibacteria bacterium] diamond 150 45.8 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
32478632 32478632 PRJNA414036_P_NODE_44559_length_231_cov_3.418367_g42820_i0 PRJNA414036 44559 231 3.418367 7.89642777 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 53.5 4.86e-6   NR HJP81387.1 2973664 g42820 i0 51.5 6.07792207792208 66 18 85.7 1 220 23 302 353 HJP81387.1 LCP family protein [Candidatus Saccharimonadales bacterium] diamond 1404 53.5 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
32762190 32762190 PRJNA414036_P_NODE_42020_length_231_cov_4.525510_g40281_i0 PRJNA414036 42020 231 4.52551 10.4539281 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 41.2 0.0451   NR HEY1085400.1 2973664 g40281 i0 90.9 0.285714285714286 22 2 28.6 0 160 225 47 68 HEY1085400.1 50S ribosomal protein L14 [Candidatus Saccharimonadales bacterium] diamond 66 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;