RNAquarium Metadata Server
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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA414036" and tax_clade = "core chlorophytes"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • core chlorophytes · 11 ✖

bioproject 1

  • PRJNA414036 · 11 ✖

analysis 1

  • diamond · 11 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26600421 26600421 PRJNA414036_P_NODE_24221_length_308_cov_3.186813_g22489_i0 PRJNA414036 24221 308 3.186813 9.81538404 Trebouxia sp. A1-2 2608996 Plants Plants 81.6 8.62e-16   NR KAA6423777.1 2608996 g22489 i0 46.4 0.944805194805195 97 49 91.6 1 4 285 50 146 KAA6423777.1 MAG: hypothetical protein FRX49_06348 [Trebouxia sp. A1-2] diamond 291 81.6 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. A1-2
27802233 27802233 PRJNA414036_P_NODE_53524_length_231_cov_1.632653_g51785_i0 PRJNA414036 53524 231 1.632653 3.77142843 Chloroidium sp. KL-2 2812591 Plants Plants 43.5 0.00551   NR WDY12788.1 3031248 g51785 i0 86.4 0.285714285714286 22 3 28.6 0 10 75 42 63 WDY12788.1 ribosomal protein L19 [Chloroidium sp. KL-2023a] diamond 66 43.5 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Watanabeales Watanabeaceae Chloroidium Chloroidium sp. KL-2023a
28275588 28275588 PRJNA414036_P_NODE_37166_length_242_cov_6.415459_g35427_i0 PRJNA414036 37166 242 6.415459 15.52541078 Bryopsis sp. KO-2 3115439 Plants Plants 67.8 5.66e-11   NR GMH43826.1 3041901 g35427 i0 66.7 1.11570247933884 45 15 55.8 0 190 56 1584 1628 GMH43826.1 hypothetical protein BSKO_11760 [Bryopsis sp. KO-2023] diamond 270 67.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023
28686413 28686413 PRJNA414036_P_NODE_44747_length_231_cov_3.357143_g43008_i0 PRJNA414036 44747 231 3.357143 7.75500033 Trebouxia sp. C 2796353 Plants Plants 52.4 1.27e-5   NR KAL0035942.1 2905653 g43008 i0 100 0.857142857142857 22 0 28.6 0 157 222 191 212 KAL0035942.1 hypothetical protein WJX77_008507 [Trebouxia sp. C0004] diamond 198 52.4 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0004
30882018 30882018 PRJNA414036_P_NODE_80974_length_161_cov_4.246032_g79235_i0 PRJNA414036 80974 161 4.246032 6.83611152 Chlorophyta 3041 Plants Plants 50.1 3.2e-5   NR CAD7696789.1 121088 g79235 i0 71.4 10.0807453416149 49 14 91.3 0 157 11 1493 1541 CAD7696789.1 unnamed protein product [Ostreobium quekettii] diamond 1623 50.1 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Ostreobiaceae Ostreobium Ostreobium quekettii
31055311 31055311 PRJNA414036_P_NODE_7755_length_467_cov_7.895833_g6447_i0 PRJNA414036 7755 467 7.895833 36.87354011 Volvox reticuliferus 1737510 Plants Plants 49.7 5.84e-4   NR GIL85124.1 1737510 g6447 i0 42.4 0.423982869379015 66 38 42.4 0 299 102 80 145 GIL85124.1 hypothetical protein Vretifemale_13751, partial [Volvox reticuliferus] diamond 198 49.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Volvocaceae Volvox Volvox reticuliferus
31117957 31117957 PRJNA414036_P_NODE_52055_length_231_cov_1.867347_g50316_i0 PRJNA414036 52055 231 1.867347 4.31357157 Trebouxia sp. C 2796353 Plants Plants 66.2 1.72e-10   NR KAL3133778.1 3373145 g50316 i0 54.9 0.922077922077922 71 18 92.2 1 10 222 541 597 KAL3133778.1 hypothetical protein ABBQ32_008258 [Trebouxia sp. C0010 RCD-2024] diamond 213 66.2 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
31212553 31212553 PRJNA414036_P_NODE_10715_length_426_cov_6.918159_g9170_i0 PRJNA414036 10715 426 6.918159 29.47135734 Dunaliella salina 3046 Plants Plants 45.8 0.0184   NR KAF5831003.1 3046 g9170 i0 83.3 15.2112676056338 30 5 21.1 0 154 65 340 369 KAF5831003.1 eukaryotic initiation factor [Dunaliella salina] diamond 6480 45.8 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
31244572 31244572 PRJNA414036_P_NODE_52915_length_231_cov_1.729592_g51176_i0 PRJNA414036 52915 231 1.729592 3.99535752 Trebouxia sp. C 2796353 Plants Plants 54.3 2.64e-6   NR KAL3154486.1 3373145 g51176 i0 95.8 0.311688311688312 24 1 31.2 0 157 228 226 249 KAL3154486.1 hypothetical protein ABBQ32_013949 [Trebouxia sp. C0010 RCD-2024] diamond 72 54.3 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Trebouxiophyceae Trebouxiales Trebouxiaceae Trebouxia Trebouxia sp. C0010 RCD-2024
32431871 32431871 PRJNA414036_P_NODE_26299_length_294_cov_6.061776_g24565_i0 PRJNA414036 26299 294 6.061776 17.82162144 Viridiplantae 33090 Plants Plants 57 6.3e-7   NR KAF5843682.1 3046 g24565 i0 50 42.1224489795918 86 43 87.8 0 260 3 318 403 KAF5843682.1 peptidase M24, structural domain-containing protein [Dunaliella salina] diamond 12384 57 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Chlorophyceae Chlamydomonadales Dunaliellaceae Dunaliella Dunaliella salina
32856596 32856596 PRJNA414036_P_NODE_17720_length_356_cov_6.713396_g16009_i0 PRJNA414036 17720 356 6.713396 23.89968976 Bryopsis sp. KO-2 3115439 Plants Plants 44.7 0.00671   NR GMH41053.1 3041901 g16009 i0 43.8 0.615168539325843 73 41 61.5 0 349 131 23 95 GMH41053.1 hypothetical protein BSKO_08963 [Bryopsis sp. KO-2023] diamond 219 44.7 1 Eukaryota core chlorophytes Viridiplantae Chlorophyta Ulvophyceae Bryopsidales Bryopsidaceae Bryopsis Bryopsis sp. KO-2023

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;