contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA408129" and tax_phylum = "Spirochaetota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29145146 | 29145146 | PRJNA408129_S_NODE_16369_length_190_cov_3.006536_g16351_i0 | PRJNA408129 | 16369 | 190 | 3.006536 | 5.7124184 | Spirochaetales | 136 | Bacteria | Bacteria | 119 | 1.81e-29 | NR | WP_132780366.1 | 2094121 | g16351 | i0 | 96.7 | 2.84210526315789 | 60 | 2 | 94.7 | 0 | 180 | 1 | 48 | 107 | WP_132780366.1 4Fe-4S binding protein [Treponema sp. J25] | diamond | 540 | 120 | 0.991666666666667 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema sp. J25 | ||
| 29886154 | 29886154 | PRJNA408129_S_NODE_4251_length_279_cov_4.830579_g4233_i0 | PRJNA408129 | 4251 | 279 | 4.830579 | 13.47731541 | Sphaerochaeta associata | 1129264 | Bacteria | Bacteria | 43.1 | 0.0353 | NR | WP_323385125.1 | 1129264 | g4233 | i0 | 28.8 | 0.709677419354839 | 66 | 45 | 68.8 | 1 | 279 | 88 | 76 | 141 | WP_323385125.1 GntR family transcriptional regulator [Sphaerochaeta associata] | diamond | 198 | 43.1 | 1 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Sphaerochaetaceae | Sphaerochaeta | Sphaerochaeta associata | ||
| 30882009 | 30882009 | PRJNA408129_S_NODE_14474_length_198_cov_1.409938_g14456_i0 | PRJNA408129 | 14474 | 198 | 1.409938 | 2.79167724 | Treponema | 157 | Bacteria | Bacteria | 102 | 6.93e-24 | NR | WP_303932638.1 | 158 | g14456 | i0 | 79 | 4.6969696969697 | 62 | 13 | 93.9 | 0 | 192 | 7 | 297 | 358 | WP_303932638.1 UDP-N-acetylmuramyl-tripeptide synthetase, partial [Treponema denticola] | diamond | 930 | 103 | 0.990291262135922 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Spirochaetales | Treponemataceae | Treponema | Treponema denticola | ||
| 32747284 | 32747284 | PRJNA408129_S_NODE_16840_length_188_cov_5.291391_g16822_i0 | PRJNA408129 | 16840 | 188 | 5.291391 | 9.94781508 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 101 | 1.04e-24 | NR | MCE9500260.1 | 178 | g16822 | i0 | 84.5 | 1.85106382978723 | 58 | 9 | 92.6 | 0 | 175 | 2 | 61 | 118 | MCE9500260.1 alpha/beta fold hydrolase [Leptospira sp.] | diamond | 348 | 102 | 0.990196078431373 | Bacteria | Pseudomonadati | Spirochaetota | Spirochaetia | Leptospirales | Leptospiraceae | Leptospira | Leptospira sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;