RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA408129" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA408129 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30423448 30423448 PRJNA408129_S_NODE_5913_length_255_cov_5.160550_g5895_i0 PRJNA408129 5913 255 5.16055 13.1594025 Erysiphe necator associated fusarivirus 1 2695354 Viruses Viruses 46.6 3.78e-4   NR QHD64835.1 2695354 g5895 i0 37.1 0.729411764705882 62 39 72.9 0 21 206 47 108 QHD64835.1 ORF-C [Erysiphe necator associated fusarivirus 1] diamond 186 46.6 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Fusariviridae   Erysiphe necator associated fusarivirus 1
32636024 32636024 PRJNA408129_S_NODE_2360_length_322_cov_14.063158_g2342_i0 PRJNA408129 2360 322 14.063158 45.28336876 Fusarium poae partitivirus 2 1849533 Viruses Viruses 66.6 3.73e-10   NR YP_009272948.1 1849533 g2342 i0 70 0.372670807453416 40 12 37.3 0 3 122 610 649 YP_009272948.1 capsid protein [Fusarium poae partitivirus 2] diamond 120 66.6 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Partitiviridae   Fusarium poae partitivirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;