RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA408129" and tax_kingdom = "Heunggongvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Heunggongvirae · 4 ✖

bioproject 1

  • PRJNA408129 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16995788 16995788 PRJNA408129_S_NODE_14814_length_196_cov_4.031447_g14796_i0 PRJNA408129 14814 196 4.031447 7.90163612 Caudoviricetes sp. 2832643 Viruses Viruses 87 8.78e-21   NR XOS31861.1 2832643 g14796 i0 91.5 0.719387755102041 47 4 71.9 0 143 3 3 49 XOS31861.1 MAG: hypothetical protein MSP0777_13 [Caudoviricetes sp.] diamond 141 87 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
29980780 29980780 PRJNA408129_S_NODE_10231_length_220_cov_3.650273_g10213_i0 PRJNA408129 10231 220 3.650273 8.0306006 Caudoviricetes sp. 2832643 Viruses Viruses 48.1 3.41e-4   NR XOR29252.1 2832643 g10213 i0 32.8 0.790909090909091 58 38 77.7 1 206 36 1055 1112 XOR29252.1 MAG: DNA polymerase III alpha subunit [Caudoviricetes sp.] diamond 174 48.1 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
30960281 30960281 PRJNA408129_S_NODE_31554_length_156_cov_1.285714_g31536_i0 PRJNA408129 31554 156 1.285714 2.00571384 Caudoviricetes sp. 2832643 Viruses Viruses 60.8 4.53e-9   NR XOR78576.1 2832643 g31536 i0 96.4 1.05769230769231 28 1 53.8 0 154 71 658 685 XOR78576.1 MAG: putative tail fiber protein H [Caudoviricetes sp.] diamond 165 60.8 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       Caudoviricetes sp.
31181061 31181061 PRJNA408129_S_NODE_20095_length_178_cov_7.049645_g20077_i0 PRJNA408129 20095 178 7.049645 12.5483681 Acinetobacter phage vB_AbaM_ME3 1837876 Viruses Viruses 46.2 9.16e-4   NR YP_009595867.1 1837876 g20077 i0 36.5 0.876404494382023 52 33 87.6 0 18 173 225 276 YP_009595867.1 virion structural protein [Acinetobacter phage vB_AbaM_ME3] diamond 156 46.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes     Metrivirus Metrivirus ME3

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;