RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA408129" and tax_clade = "unclassified ssRNA positive-strand viruses"

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tax_superkingdom 1

tax_clade 1

  • unclassified ssRNA positive-strand viruses · 2 ✖

bioproject 1

  • PRJNA408129 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_phylum 0

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27454979 27454979 PRJNA408129_S_NODE_3023_length_304_cov_2.595506_g3005_i0 PRJNA408129 3023 304 2.595506 7.89033824 Indomegoura indica nege-like virus 1 2830222 Viruses Viruses 45.4 0.00606   NR QUE41596.1 2830222 g3005 i0 60 0.394736842105263 40 15 38.5 1 124 8 10 49 QUE41596.1 ORF3 [Indomegoura indica nege-like virus 1] diamond 120 45.4 1 Viruses unclassified ssRNA positive-strand viruses             Indomegoura indica nege-like virus 1
31719040 31719040 PRJNA408129_S_NODE_157_length_541_cov_33.716270_g145_i0 PRJNA408129 157 541 33.71627 182.4050207 Indomegoura indica nege-like virus 1 2830222 Viruses Viruses 175 5.239999999999999e-52   NR QUE41596.1 2830222 g145 i0 72.5 0.66543438077634 120 32 66.5 1 531 172 89 207 QUE41596.1 ORF3 [Indomegoura indica nege-like virus 1] diamond 360 175 1 Viruses unclassified ssRNA positive-strand viruses             Indomegoura indica nege-like virus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;