RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA407368" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA407368 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29113311 29113311 PRJNA407368_S_NODE_8988_length_168_cov_3.625899_g8886_i0 PRJNA407368 8988 168 3.625899 6.09151032 Fungi 4751 Fungi Fungi 55.1 1.37e-7   NR ORY97971.1 13706 g8886 i0 60.4 2.78571428571429 48 19 85.7 0 144 1 8 55 ORY97971.1 ribosomal protein L23/L15e core domain-containing protein [Syncephalastrum racemosum] diamond 468 55.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Syncephalastraceae Syncephalastrum Syncephalastrum racemosum
32320449 32320449 PRJNA407368_S_NODE_9439_length_162_cov_6.774436_g9337_i0 PRJNA407368 9439 162 6.774436 10.97458632 Dichotomocladium elegans 101130 Fungi Fungi 52.8 3.51e-6   NR KAI9310440.1 101130 g9337 i0 75 0.592592592592593 32 8 59.3 0 65 160 164 195 KAI9310440.1 hypothetical protein BX666DRAFT_2032824 [Dichotomocladium elegans] diamond 96 52.8 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Dichotomocladium Dichotomocladium elegans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;