RNAquarium Metadata Server
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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA407368" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 8 ✖

tax_clade 1

bioproject 1

  • PRJNA407368 · 8 ✖

analysis 1

  • diamond · 8 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27896590 27896590 PRJNA407368_S_NODE_8865_length_170_cov_2.531915_g8763_i0 PRJNA407368 8865 170 2.531915 4.3042555 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 107 1.7e-25   NR XP_002674724.1 5762 g8763 i0 98.2 0.988235294117647 56 1 98.8 0 168 1 527 582 XP_002674724.1 uncharacterized protein NAEGRDRAFT_70116 [Naegleria gruberi] diamond 168 107 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28275478 28275478 PRJNA407368_S_NODE_10046_length_156_cov_1.818898_g9944_i0 PRJNA407368 10046 156 1.818898 2.83748088 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 106 4.88e-28   NR XP_002670564.1 5762 g9944 i0 98 0.980769230769231 51 1 98.1 0 155 3 81 131 XP_002670564.1 uncharacterized protein NAEGRDRAFT_59665 [Naegleria gruberi] diamond 153 106 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30075327 30075327 PRJNA407368_S_NODE_10692_length_150_cov_1.256198_g10590_i0 PRJNA407368 10692 150 1.256198 1.8842970000000001 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 92 3.51e-21   NR XP_002670780.1 5762 g10590 i0 92 1 50 4 100 0 1 150 129 178 XP_002670780.1 uncharacterized protein NAEGRDRAFT_81767 [Naegleria gruberi] diamond 150 92 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30644007 30644007 PRJNA407368_S_NODE_9673_length_160_cov_2.076336_g9571_i0 PRJNA407368 9673 160 2.076336 3.3221376 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 107 8.37e-26   NR XP_002673143.1 5762 g9571 i0 98.1 0.99375 53 1 99.4 0 2 160 347 399 XP_002673143.1 UDP-glucose pyrophosphorylase 2-like protein [Naegleria gruberi] diamond 159 107 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
30802091 30802091 PRJNA407368_S_NODE_6434_length_210_cov_2.375691_g6332_i0 PRJNA407368 6434 210 2.375691 4.9889511 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 83.6 1.02e-16   NR XP_002670340.1 5762 g6332 i0 79.6 0.771428571428571 54 11 77.1 0 168 7 586 639 XP_002670340.1 uncharacterized protein NAEGRDRAFT_81874 [Naegleria gruberi] diamond 162 83.6 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31687264 31687264 PRJNA407368_S_NODE_4557_length_266_cov_3.097046_g4455_i0 PRJNA407368 4557 266 3.097046 8.23814236 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 62 7.86e-9   NR XP_002682034.1 5762 g4455 i0 82.6 0.778195488721805 69 12 77.8 0 207 1 78 146 XP_002682034.1 uncharacterized protein NAEGRDRAFT_78127 [Naegleria gruberi] diamond 207 62 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31971983 31971983 PRJNA407368_S_NODE_9838_length_158_cov_2.007752_g9736_i0 PRJNA407368 9838 158 2.007752 3.17224816 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 72 5.18e-13   NR XP_002680679.1 5762 g9736 i0 63.5 0.987341772151899 52 19 98.7 0 158 3 57 108 XP_002680679.1 von Willebrand factor type A domain-containing protein [Naegleria gruberi] diamond 156 72 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
32066867 32066867 PRJNA407368_S_NODE_3298_length_324_cov_12.938983_g3196_i0 PRJNA407368 3298 324 12.938983 41.92230492 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 121 1.99e-29   NR XP_002673222.1 5762 g3196 i0 84.4 0.592592592592593 64 10 59.3 0 131 322 904 967 XP_002673222.1 leucine rich repeat protein [Naegleria gruberi] diamond 192 121 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;