RNAquarium Metadata Server
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contig_metadata

1 row where analysis = "diamond", bioproject = "PRJNA407368" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Orthornavirae · 1 ✖

bioproject 1

  • PRJNA407368 · 1 ✖

analysis 1

  • diamond · 1 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689832 1689832 PRJNA407368_S_NODE_102_length_1916_cov_11.267621_g99_i0 PRJNA407368 102 1916 11.267621 215.88761836 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 759 1.0599999999999998e-249   NR WKU61618.1 3063761 g99 i0 81.4 0.75 479 89 75 0 478 1914 1120 1598 WKU61618.1 polyprotein [Zebrafish picornavirus 2] diamond 1437 759 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae   Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;