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contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA407368" and tax_clade = "PVC group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • PVC group · 27 ✖

bioproject 1

  • PRJNA407368 · 27 ✖

analysis 1

  • diamond · 27 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25307873 25307873 PRJNA407368_S_NODE_7640_length_187_cov_1.822785_g7538_i0 PRJNA407368 7640 187 1.822785 3.40860795 Verrucomicrobiaceae 203557 Bacteria Bacteria 88.6 1.31e-20   NR WP_146853805.1 748831 g7538 i0 97.7 2.06951871657754 43 1 69 0 129 1 1 43 WP_146853805.1 50S ribosomal protein L11 [Brevifollis gellanilyticus] diamond 387 88.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Brevifollis Brevifollis gellanilyticus
26600321 26600321 PRJNA407368_S_NODE_2181_length_415_cov_9.398964_g2080_i0 PRJNA407368 2181 415 9.398964 39.0057006 Planctomycetota bacterium 2026780 Bacteria Bacteria 79 2.56e-14   NR MFO0417818.1 2026780 g2080 i0 35.5 1.01927710843373 141 74 94 5 3 392 13 147 MFO0417818.1 hypothetical protein [Planctomycetota bacterium] diamond 423 79 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
26758823 26758823 PRJNA407368_S_NODE_8601_length_173_cov_3.256944_g8499_i0 PRJNA407368 8601 173 3.256944 5.63451312 Akkermansiaceae bacterium 2562705 Bacteria Bacteria 112 4.81e-29   NR MCX8494651.1 2562705 g8499 i0 89.5 2.96531791907514 57 6 98.8 0 172 2 117 173 MCX8494651.1 WYL domain-containing protein [Akkermansiaceae bacterium] diamond 513 112 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Akkermansiaceae   Akkermansiaceae bacterium
26822442 26822442 PRJNA407368_S_NODE_8301_length_177_cov_2.472973_g8199_i0 PRJNA407368 8301 177 2.472973 4.37716221 Candidatus Auribacterota bacterium 2093365 Bacteria Bacteria 42.4 0.0212   NR MCK5161639.1 2093365 g8199 i0 52.4 1.42372881355932 42 20 71.2 0 2 127 977 1018 MCK5161639.1 fibronectin type III domain-containing protein [Candidatus Auribacterota bacterium] diamond 252 42.4 1 Bacteria PVC group Pseudomonadati Candidatus Auribacterota         Candidatus Auribacterota bacterium
27296715 27296715 PRJNA407368_S_NODE_2343_length_400_cov_7.722372_g2241_i0 PRJNA407368 2343 400 7.722372 30.889488 Chlamydiales bacterium 2047757 Bacteria Bacteria 76.3 4.4e-13   NR MCE5294811.1 2047757 g2241 i0 46.7 0.69 92 48 69 1 327 52 180 270 MCE5294811.1 amino acid adenylation domain-containing protein [Chlamydiales bacterium] diamond 276 76.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
27549309 27549309 PRJNA407368_S_NODE_7164_length_195_cov_4.584337_g7062_i0 PRJNA407368 7164 195 4.584337 8.93945715 Planctomycetes bacterium RBG_13_5 2026780 Bacteria Bacteria 77.4 2.77e-15   NR OHB65247.1 1801962 g7062 i0 57.8 0.984615384615385 64 27 98.5 0 194 3 10 73 OHB65247.1 MAG: hypothetical protein A2168_08255 [Planctomycetes bacterium RBG_13_50_24] diamond 192 77.4 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium RBG_13_50_24
27739197 27739197 PRJNA407368_S_NODE_7364_length_192_cov_2.546012_g7262_i0 PRJNA407368 7364 192 2.546012 4.88834304 Candidatus Omnitrophica bacterium CG23_combo_of_CG 2035772 Bacteria Bacteria 105 7.399999999999998e-25   NR PIP19855.1 1974757 g7262 i0 78.1 2 64 14 100 0 192 1 156 219 PIP19855.1 MAG: glucose-1-phosphate adenylyltransferase [Candidatus Omnitrophica bacterium CG23_combo_of_CG06-09_8_20_14_all_41_10] diamond 384 105 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota       Candidatus Sherwoodlollariibacterium Candidatus Sherwoodlollariibacterium unditelluris
27991567 27991567 PRJNA407368_S_NODE_945_length_659_cov_5.171429_g872_i0 PRJNA407368 945 659 5.171429 34.07971711 Limisphaerales bacterium 2052186 Bacteria Bacteria 116 7.24e-26   NR MFN7140247.1 2052186 g872 i0 39 0.723823975720789 159 96 71.9 1 161 634 83 241 MFN7140247.1 phage tail tape measure C-terminal domain-containing protein [Limisphaerales bacterium] diamond 477 116 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Limisphaerales     Limisphaerales bacterium
28117609 28117609 PRJNA407368_S_NODE_5085_length_246_cov_4.055300_g4983_i0 PRJNA407368 5085 246 4.0553 9.976038 Prosthecobacter sp. 1965333 Bacteria Bacteria 43.9 0.0143   NR WP_395741070.1 1965333 g4983 i0 39.3 0.74390243902439 61 37 74.4 0 20 202 261 321 WP_395741070.1 hypothetical protein [Prosthecobacter sp.] diamond 183 43.9 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
29349194 29349194 PRJNA407368_S_NODE_7749_length_185_cov_2.634615_g7647_i0 PRJNA407368 7749 185 2.634615 4.87403775 Estrella lausannensis 483423 Bacteria Bacteria 51.6 1.26e-5   NR WP_098039224.1 483423 g7647 i0 51.7 0.940540540540541 58 27 94.1 1 185 12 279 335 WP_098039224.1 NO-inducible flavohemoprotein [Estrella lausannensis] diamond 174 51.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Criblamydiaceae Estrella Estrella lausannensis
29412171 29412171 PRJNA407368_S_NODE_6069_length_218_cov_3.444444_g5967_i0 PRJNA407368 6069 218 3.444444 7.50888792 Verrucomicrobiales bacterium 2026801 Bacteria Bacteria 61.6 4.33e-9   NR HCN76532.1 2026801 g5967 i0 62.2 1.41743119266055 45 16 60.6 1 207 76 114 158 HCN76532.1 hypothetical protein [Verrucomicrobiales bacterium] diamond 309 61.6 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales     Verrucomicrobiales bacterium
29601394 29601394 PRJNA407368_S_NODE_1370_length_541_cov_8.160156_g1280_i0 PRJNA407368 1370 541 8.160156 44.14644396 Verrucomicrobiaceae bacterium 2026800 Bacteria Bacteria 122 1.54e-28   NR MBL9132061.1 2026800 g1280 i0 89.2 0.360443622920518 65 7 36 0 237 431 619 683 MBL9132061.1 hypothetical protein [Verrucomicrobiaceae bacterium] diamond 195 122 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae   Verrucomicrobiaceae bacterium
29664483 29664483 PRJNA407368_S_NODE_1830_length_461_cov_3.939815_g1733_i0 PRJNA407368 1830 461 3.939815 18.16254715 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 119 2.85e-29   NR HRZ15357.1 2035772 g1733 i0 54.3 0.611713665943601 94 43 61.2 0 345 64 213 306 HRZ15357.1 phage major capsid protein [Candidatus Omnitrophota bacterium] diamond 282 119 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30170101 30170101 PRJNA407368_S_NODE_4912_length_252_cov_4.098655_g4810_i0 PRJNA407368 4912 252 4.098655 10.3286106 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 78.6 2.81e-15   NR MCG3176940.1 2035772 g4810 i0 53 0.785714285714286 66 31 78.6 0 10 207 32 97 MCG3176940.1 hypothetical protein [Candidatus Omnitrophota bacterium] diamond 198 78.6 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium
30201586 30201586 PRJNA407368_S_NODE_7672_length_186_cov_3.675159_g7570_i0 PRJNA407368 7672 186 3.675159 6.83579574 Planctomycetes bacterium RBG_13_5 2026780 Bacteria Bacteria 55.5 4e-7   NR OHB65247.1 1801962 g7570 i0 48.2 1.80645161290323 56 28 88.7 1 184 20 67 122 OHB65247.1 MAG: hypothetical protein A2168_08255 [Planctomycetes bacterium RBG_13_50_24] diamond 336 55.5 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetes bacterium RBG_13_50_24
30233424 30233424 PRJNA407368_S_NODE_7692_length_186_cov_2.694268_g7590_i0 PRJNA407368 7692 186 2.694268 5.01133848 Prosthecobacter sp. 1965333 Bacteria Bacteria 104 2.95e-25   NR MCW0219802.1 1965333 g7590 i0 80.6 2 62 12 100 0 186 1 52 113 MCW0219802.1 hypothetical protein [Prosthecobacter sp.] diamond 372 104 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Prosthecobacter Prosthecobacter sp.
30675616 30675616 PRJNA407368_S_NODE_4873_length_253_cov_5.401786_g4771_i0 PRJNA407368 4873 253 5.401786 13.66651858 Planctomycetota bacterium 2026780 Bacteria Bacteria 56.2 2.1e-8   NR MEM8668760.1 2026780 g4771 i0 48.8 0.509881422924901 43 22 51 0 201 73 14 56 MEM8668760.1 hypothetical protein [Planctomycetota bacterium] diamond 129 56.2 1 Bacteria PVC group Pseudomonadati Planctomycetota         Planctomycetota bacterium
30833740 30833740 PRJNA407368_S_NODE_3554_length_311_cov_4.141844_g3452_i0 PRJNA407368 3554 311 4.141844 12.88113484 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 126 2.94e-33   NR MFI0435901.1 2052176 g3452 i0 89.7 0.655948553054662 68 7 65.6 0 1 204 117 184 MFI0435901.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 204 126 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
30897124 30897124 PRJNA407368_S_NODE_5194_length_242_cov_3.544601_g5092_i0 PRJNA407368 5194 242 3.544601 8.57793442 Zavarzinella formosa 360055 Bacteria Bacteria 61.2 1.59e-9   NR WP_157369949.1 360055 g5092 i0 58.9 0.694214876033058 56 22 68.2 1 2 166 15 70 WP_157369949.1 hypothetical protein [Zavarzinella formosa] diamond 168 61.2 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae Zavarzinella Zavarzinella formosa
30960197 30960197 PRJNA407368_S_NODE_9314_length_164_cov_2.607407_g9212_i0 PRJNA407368 9314 164 2.607407 4.27614748 Opitutaceae bacterium 2006848 Bacteria Bacteria 62.4 1.17e-9   NR MBK8857386.1 2006848 g9212 i0 44.4 0.98780487804878 54 30 98.8 0 2 163 8 61 MBK8857386.1 methyltransferase domain-containing protein [Opitutaceae bacterium] diamond 162 62.4 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae   Opitutaceae bacterium
31134473 31134473 PRJNA407368_S_NODE_4595_length_264_cov_9.234043_g4493_i0 PRJNA407368 4595 264 9.234043 24.37787352 Pseudomonadati 3379134 Bacteria Bacteria 93.2 8.84e-20   NR MFU8893939.1 1962973 g4493 i0 59.8 1.875 82 33 93.2 0 251 6 1257 1338 MFU8893939.1 InlB B-repeat-containing protein [Luteolibacter sp.] diamond 495 93.2 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Verrucomicrobiia Verrucomicrobiales Verrucomicrobiaceae Luteolibacter Luteolibacter sp.
31339340 31339340 PRJNA407368_S_NODE_4156_length_282_cov_9.505929_g4054_i0 PRJNA407368 4156 282 9.505929 26.80671978 Lacunisphaera sp. 1961806 Bacteria Bacteria 99 4.52e-23   NR HEY8994270.1 1961806 g4054 i0 53.1 0.861702127659574 81 37 85.1 1 281 42 117 197 HEY8994270.1 hypothetical protein [Lacunisphaera sp.] diamond 243 99 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota Opitutia Opitutales Opitutaceae Lacunisphaera Lacunisphaera sp.
31482878 31482878 PRJNA407368_S_NODE_6776_length_203_cov_2.522989_g6674_i0 PRJNA407368 6776 203 2.522989 5.12166767 PVC group 1783257 Bacteria Bacteria 70.5 1.11e-12   NR PYJ66209.1 2026799 g6674 i0 59 3.54679802955665 61 25 90.1 0 21 203 165 225 PYJ66209.1 MAG: hypothetical protein DME76_17385 [Verrucomicrobiota bacterium] diamond 720 71.2 0.990168539325843 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
31561016 31561016 PRJNA407368_S_NODE_416_length_987_cov_7.930063_g380_i0 PRJNA407368 416 987 7.930063 78.26972181 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 53.1 5.31e-4   NR MFI0435897.1 2052176 g380 i0 61.5 0.11854103343465 39 15 11.9 0 134 250 221 259 MFI0435897.1 hypothetical protein [Parachlamydiaceae bacterium] diamond 117 53.1 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
32225266 32225266 PRJNA407368_S_NODE_9278_length_164_cov_8.822222_g9176_i0 PRJNA407368 9278 164 8.822222 14.46844408 Verrucomicrobiota bacterium 2026799 Bacteria Bacteria 104 2.4199999999999998e-24   NR MEY4385138.1 2026799 g9176 i0 87 0.98780487804878 54 7 98.8 0 1 162 286 339 MEY4385138.1 hypothetical protein [Verrucomicrobiota bacterium] diamond 162 104 1 Bacteria PVC group Pseudomonadati Verrucomicrobiota         Verrucomicrobiota bacterium
32351969 32351969 PRJNA407368_S_NODE_10299_length_153_cov_2.806452_g10197_i0 PRJNA407368 10299 153 2.806452 4.29387156 Gemmataceae bacterium 2052164 Bacteria Bacteria 58.5 2.78e-8   NR MFO0930928.1 2052164 g10197 i0 66 0.92156862745098 47 16 92.2 0 5 145 217 263 MFO0930928.1 ISAs1 family transposase [Gemmataceae bacterium] diamond 141 58.5 1 Bacteria PVC group Pseudomonadati Planctomycetota Planctomycetia Gemmatales Gemmataceae   Gemmataceae bacterium
32856492 32856492 PRJNA407368_S_NODE_1740_length_473_cov_8.211712_g1644_i0 PRJNA407368 1740 473 8.211712 38.84139776 Candidatus Omnitrophota bacterium 2035772 Bacteria Bacteria 192 3.039999999999999e-55   NR MDP3723116.1 2035772 g1644 i0 56.1 0.995771670190275 157 69 99.6 0 471 1 102 258 MDP3723116.1 cytochrome c biogenesis protein ResB [Candidatus Omnitrophota bacterium] diamond 471 192 1 Bacteria PVC group Pseudomonadati Candidatus Omnitrophota         Candidatus Omnitrophota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;