contig_metadata
5 rows where analysis = "diamond", bioproject = "PRJNA407087" and tax_phylum = "Chlamydiota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 29443594 | 29443594 | PRJNA407087_S_NODE_7650_length_176_cov_1.823129_g7187_i0 | PRJNA407087 | 7650 | 176 | 1.823129 | 3.20870704 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 63.2 | 9.32e-10 | NR | MFT5050156.1 | 2047757 | g7187 | i0 | 47.5 | 5.01136363636364 | 59 | 30 | 98.9 | 1 | 175 | 2 | 241 | 299 | MFT5050156.1 acetylornithine deacetylase/succinyl-diaminopimelate desuccinylase-like protein [Chlamydiales bacterium] | diamond | 882 | 63.2 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31086523 | 31086523 | PRJNA407087_S_NODE_6255_length_200_cov_3.789474_g5792_i0 | PRJNA407087 | 6255 | 200 | 3.789474 | 7.578948 | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8 | 1797601 | Bacteria | Bacteria | 84 | 4.19e-18 | NR | OGN59821.1 | 1797601 | g5792 | i0 | 54.5 | 1.98 | 66 | 30 | 99 | 0 | 198 | 1 | 105 | 170 | OGN59821.1 MAG: superoxide dismutase [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8] | diamond | 396 | 84 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8 | |||||
| 31149256 | 31149256 | PRJNA407087_S_NODE_1855_length_488_cov_57.832244_g1412_i0 | PRJNA407087 | 1855 | 488 | 57.832244 | 282.22135072 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 145 | 2.64e-41 | NR | MCP5470421.1 | 2047757 | g1412 | i0 | 53 | 2.60655737704918 | 151 | 65 | 91.6 | 2 | 480 | 34 | 11 | 157 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 1272 | 145 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 31529324 | 31529324 | PRJNA407087_S_NODE_1576_length_538_cov_40.214145_g1152_i0 | PRJNA407087 | 1576 | 538 | 40.214145 | 216.3521001 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 148 | 4.229999999999999e-42 | NR | MCP5470421.1 | 2047757 | g1152 | i0 | 51.9 | 3.32899628252788 | 156 | 69 | 85.9 | 2 | 495 | 34 | 6 | 157 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 1791 | 148 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium | |||
| 32320437 | 32320437 | PRJNA407087_S_NODE_7579_length_177_cov_1.979730_g7116_i0 | PRJNA407087 | 7579 | 177 | 1.97973 | 3.5041221 | Chlamydiales bacterium | 2047757 | Bacteria | Bacteria | 103 | 1.52e-26 | NR | MCP5470421.1 | 2047757 | g7116 | i0 | 82.8 | 0.983050847457627 | 58 | 10 | 98.3 | 0 | 3 | 176 | 53 | 110 | MCP5470421.1 hypothetical protein [Chlamydiales bacterium] | diamond | 174 | 103 | 1 | Bacteria | PVC group | Pseudomonadati | Chlamydiota | Chlamydiia | Chlamydiales | Chlamydiales bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;