RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA407087" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA407087 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29254154 29254154 PRJNA407087_S_NODE_3589_length_304_cov_4.658182_g3126_i0 PRJNA407087 3589 304 4.658182 14.16087328 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 114 4.7e-29   NR HTZ34286.1 2072417 g3126 i0 64.3 5.0625 84 29 82.9 1 254 3 4 86 HTZ34286.1 CoA transferase subunit A [Candidatus Methylomirabilota bacterium] diamond 1539 114 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30612428 30612428 PRJNA407087_S_NODE_9073_length_158_cov_4.100775_g8610_i0 PRJNA407087 9073 158 4.100775 6.4792245 Candidatus Methylomirabilales bacterium 3159508 Bacteria Bacteria 39.3 0.0283   NR MFQ5847743.1 3159508 g8610 i0 41.7 0.683544303797468 36 21 68.4 0 51 158 8 43 MFQ5847743.1 zinc ribbon domain-containing protein [Candidatus Methylomirabilales bacterium] diamond 108 39.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales     Candidatus Methylomirabilales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;