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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA407087" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 4 ✖

bioproject 1

  • PRJNA407087 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26790730 26790730 PRJNA407087_S_NODE_8501_length_164_cov_3.829630_g8038_i0 PRJNA407087 8501 164 3.82963 6.2805932 Candidatus Bathycorpusculum sp. 2994959 Archaea Archaea 41.6 0.0331   NR WP_345775476.1 2994959 g8038 i0 41.5 0.969512195121951 53 31 97 0 163 5 282 334 WP_345775476.1 phenylalanine--tRNA ligase subunit beta, partial [Candidatus Bathycorpusculum sp.] diamond 159 41.6 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia Candidatus Bathyarchaeales Candidatus Bathycorpusculaceae Candidatus Bathycorpusculum Candidatus Bathycorpusculum sp.
29050190 29050190 PRJNA407087_S_NODE_9888_length_151_cov_3.065574_g9425_i0 PRJNA407087 9888 151 3.065574 4.62901674 root 1 Root_unresolved Root_unresolved 65.5 8.75e-11   NR MFP3297360.1 2020871 g9425 i0 61.4 4.47019867549669 44 17 87.4 0 9 140 128 171 MFP3297360.1 aminotransferase class V-fold PLP-dependent enzyme [Vulcanisaeta sp.] diamond 675 65.9 0.993930197268589 Archaea   Thermoproteati Thermoproteota Thermoprotei Thermoproteales Thermoproteaceae Vulcanisaeta Vulcanisaeta sp.
31117846 31117846 PRJNA407087_S_NODE_755_length_861_cov_7.340144_g159_i2 PRJNA407087 755 861 7.340144 63.19863984 Candidatus Geocrenenecus arthurdayi 2978060 Archaea Archaea 70.5 3.79e-10   NR MCL7388697.1 2978060 g159 i2 39.8 0.358885017421603 103 58 35.9 3 524 832 25 123 MCL7388697.1 hypothetical protein [Candidatus Geocrenenecus arthurdayi] diamond 309 70.5 1 Archaea   Thermoproteati Nitrososphaerota     Candidatus Wolframiiraptoraceae Candidatus Geocrenenecus Candidatus Geocrenenecus arthurdayi
31750451 31750451 PRJNA407087_S_NODE_897_length_772_cov_8.227456_g159_i3 PRJNA407087 897 772 8.227456 63.51596032 Candidatus Geocrenenecus arthurdayi 2978060 Archaea Archaea 70.1 3.37e-10   NR MCL7388697.1 2978060 g159 i3 38.8 0.400259067357513 103 59 40 3 338 30 25 123 MCL7388697.1 hypothetical protein [Candidatus Geocrenenecus arthurdayi] diamond 309 70.1 1 Archaea   Thermoproteati Nitrososphaerota     Candidatus Wolframiiraptoraceae Candidatus Geocrenenecus Candidatus Geocrenenecus arthurdayi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;