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contig_metadata

11 rows where analysis = "diamond", bioproject = "PRJNA407087" and tax_clade = "Bacteria candidate phyla"

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tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 11 ✖

bioproject 1

  • PRJNA407087 · 11 ✖

analysis 1

  • diamond · 11 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
10618860 10618860 PRJNA407087_S_NODE_1609_length_530_cov_7.938124_g613_i1 PRJNA407087 1609 530 7.938124 42.0720572 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 154 2.47e-41   NR MDD5769349.1 2044595 g613 i1 49.7 11.1735849056604 157 77 88.9 1 8 478 295 449 MDD5769349.1 leucyl aminopeptidase family protein [Candidatus Altimarinota bacterium] diamond 5922 154 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28702847 28702847 PRJNA407087_S_NODE_3487_length_312_cov_2.996466_g3024_i0 PRJNA407087 3487 312 2.996466 9.34897392 Bacteria 2 Bacteria Bacteria 90.5 8.47e-19   NR MCS7245191.1 2052148 g3024 i0 44.7 3.98076923076923 103 51 99 2 312 4 298 394 MCS7245191.1 ornithine--oxo-acid transaminase [candidate division WOR-3 bacterium] diamond 1242 90.9 0.995599559955996 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium
29033635 29033635 PRJNA407087_S_NODE_8088_length_169_cov_3.571429_g7625_i0 PRJNA407087 8088 169 3.571429 6.03571501 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 57.4 4.65e-8   NR MCA9770713.1 2030827 g7625 i0 51.9 0.958579881656805 54 26 95.9 0 166 5 105 158 MCA9770713.1 ribosomal protein L13e [Candidatus Dependentiae bacterium] diamond 162 57.4 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
29254154 29254154 PRJNA407087_S_NODE_3589_length_304_cov_4.658182_g3126_i0 PRJNA407087 3589 304 4.658182 14.16087328 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 114 4.7e-29   NR HTZ34286.1 2072417 g3126 i0 64.3 5.0625 84 29 82.9 1 254 3 4 86 HTZ34286.1 CoA transferase subunit A [Candidatus Methylomirabilota bacterium] diamond 1539 114 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
30233410 30233410 PRJNA407087_S_NODE_3012_length_352_cov_5.111455_g2550_i0 PRJNA407087 3012 352 5.111455 17.9923216 Candidatus Aminicenantes bacterium 2052149 Bacteria Bacteria 45.1 0.0197   NR MFO7979824.1 2052149 g2550 i0 26.6 0.801136363636364 94 59 71.6 2 262 11 56 149 MFO7979824.1 hypothetical protein [Candidatus Aminicenantes bacterium] diamond 282 45.1 1 Bacteria Bacteria candidate phyla   Candidatus Aminicenantota         Candidatus Aminicenantes bacterium
30612428 30612428 PRJNA407087_S_NODE_9073_length_158_cov_4.100775_g8610_i0 PRJNA407087 9073 158 4.100775 6.4792245 Candidatus Methylomirabilales bacterium 3159508 Bacteria Bacteria 39.3 0.0283   NR MFQ5847743.1 3159508 g8610 i0 41.7 0.683544303797468 36 21 68.4 0 51 158 8 43 MFQ5847743.1 zinc ribbon domain-containing protein [Candidatus Methylomirabilales bacterium] diamond 108 39.3 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota Candidatus Methylomirabilia Candidatus Methylomirabilales     Candidatus Methylomirabilales bacterium
31687260 31687260 PRJNA407087_S_NODE_6937_length_187_cov_2.215190_g6474_i0 PRJNA407087 6937 187 2.21519 4.1424053 Minisyncoccota bacterium 2053589 Bacteria Bacteria 40 0.0415   NR MEX0598774.1 2053589 g6474 i0 41.9 0.994652406417112 62 29 94.7 2 184 8 20 77 MEX0598774.1 30S ribosomal protein S15 [Candidatus Paceibacterota bacterium] diamond 186 40 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31908758 31908758 PRJNA407087_S_NODE_6617_length_193_cov_3.048780_g6154_i0 PRJNA407087 6617 193 3.04878 5.8841454 Candidatus Hydrothermia bacterium 3014280 Bacteria Bacteria 90.5 1.65e-19   NR MDT7879665.1 3014280 g6154 i0 67.8 0.917098445595855 59 19 91.7 0 9 185 270 328 MDT7879665.1 ornithine--oxo-acid transaminase [Candidatus Hydrothermia bacterium] diamond 177 90.5 1 Bacteria Bacteria candidate phyla   Candidatus Hydrothermota Candidatus Hydrothermia       Candidatus Hydrothermia bacterium
32193595 32193595 PRJNA407087_S_NODE_438_length_1150_cov_8.553078_g267_i0 PRJNA407087 438 1150 8.553078 98.360397 Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_ 2053557 Bacteria Bacteria 48.9 0.0373   NR OGF66689.1 1798332 g267 i0 26.1 0.42 161 105 40.4 4 666 1130 487 639 OGF66689.1 MAG: sodium-translocating pyrophosphatase [Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_43_32] diamond 483 48.9 1 Bacteria Bacteria candidate phyla   Candidatus Giovannoniibacteriota         Candidatus Giovannonibacteria bacterium RIFCSPHIGHO2_02_FULL_43_32
32887880 32887880 PRJNA407087_S_NODE_7360_length_180_cov_1.662252_g6897_i0 PRJNA407087 7360 180 1.662252 2.9920536 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 48.5 7.31e-5   NR HRP38035.1 2099670 g6897 i0 40.7 0.9 54 32 90 0 8 169 49 102 HRP38035.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 162 48.5 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
32887881 32887881 PRJNA407087_S_NODE_8780_length_161_cov_4.204545_g8317_i0 PRJNA407087 8780 161 4.204545 6.76931745 candidate division WOR-3 bacterium 2052148 Bacteria Bacteria 55.1 9.18e-8   NR MCX7785919.1 2052148 g8317 i0 58.3 5.29192546583851 48 18 89.4 1 144 1 12 57 MCX7785919.1 RidA family protein [candidate division WOR-3 bacterium] diamond 852 55.1 1 Bacteria Bacteria candidate phyla   candidate division WOR-3         candidate division WOR-3 bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;