RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA404067" and tax_phylum = "Duplornaviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Duplornaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA404067 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29538455 29538455 PRJNA404067_P_NODE_28970_length_213_cov_2.750000_g28583_i0 PRJNA404067 28970 213 2.75 5.8575 Malassezia restricta associated totivirus 1 3048757 Viruses Viruses 152 2.61e-41   NR CAI9858976.1 3048757 g28583 i0 100 0.985915492957746 70 0 98.6 0 3 212 350 419 CAI9858976.1 polyprotein, partial [Malassezia restricta associated totivirus 1] diamond 210 152 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 1
29790957 29790957 PRJNA404067_P_NODE_9471_length_360_cov_0.969900_g9086_i0 PRJNA404067 9471 360 0.9699 3.49164 Malassezia restricta associated totivirus 1 3048757 Viruses Viruses 227 4.28e-68   NR CAI9858976.1 3048757 g9086 i0 90 2 120 12 100 0 1 360 215 334 CAI9858976.1 polyprotein, partial [Malassezia restricta associated totivirus 1] diamond 720 227 1 Viruses   Orthornavirae Duplornaviricota Chrymotiviricetes Ghabrivirales Orthototiviridae Totivirus Malassezia restricta associated totivirus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;