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contig_metadata

26 rows where analysis = "diamond", bioproject = "PRJNA404067" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 26 ✖

bioproject 1

  • PRJNA404067 · 26 ✖

analysis 1

  • diamond · 26 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
1689243 1689243 PRJNA404067_P_NODE_13582_length_283_cov_1.927928_g13195_i0 PRJNA404067 13582 283 1.927928 5.45603624 Nicotiana sylvestris 4096 Plants Plants 136 2.08e-35   NR XP_070002786.1 4096 g13195 i0 71.4 1.92932862190813 91 26 96.5 0 283 11 344 434 XP_070002786.1 uncharacterized protein [Nicotiana sylvestris] diamond 546 136 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Nicotiana Nicotiana sylvestris
9343023 9343023 PRJNA404067_P_NODE_41048_length_192_cov_3.580153_g40661_i0 PRJNA404067 41048 192 3.580153 6.87389376 Phtheirospermum japonicum 374723 Plants Plants 77.4 1.07e-14   NR GFP82576.1 374723 g40661 i0 66 8.578125 50 17 78.1 0 3 152 307 356 GFP82576.1 cysteine proteinase rd21a [Phtheirospermum japonicum] diamond 1647 77.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Phtheirospermum Phtheirospermum japonicum
26663609 26663609 PRJNA404067_P_NODE_26201_length_220_cov_0.911950_g25814_i0 PRJNA404067 26201 220 0.91195 2.00629 Rehmannia glutinosa 99300 Plants Plants 117 3.8499999999999996e-31   NR KAK6152942.1 99300 g25814 i0 78.1 2.98636363636364 73 16 99.5 0 220 2 75 147 KAK6152942.1 hypothetical protein DH2020_012581 [Rehmannia glutinosa] diamond 657 117 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Orobanchaceae Rehmannia Rehmannia glutinosa
26839222 26839222 PRJNA404067_P_NODE_16161_length_258_cov_1.416244_g15774_i0 PRJNA404067 16161 258 1.416244 3.65390952 Oryza 4527 Plants Plants 88.6 3.36e-18   NR CAJ86151.1 4530 g15774 i0 52.9 5.90697674418605 85 37 98.8 2 2 256 238 319 CAJ86151.1 H0413E07.4 [Oryza sativa] diamond 1524 88.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Oryza Oryza sativa
27012114 27012114 PRJNA404067_P_NODE_38862_length_201_cov_0.914286_g38475_i0 PRJNA404067 38862 201 0.914286 1.83771486 Capsicum annuum 4072 Plants Plants 48.1 2.62e-4   NR PHT94165.1 4072 g38475 i0 66.7 0.582089552238806 39 13 58.2 0 201 85 108 146 PHT94165.1 hypothetical protein T459_02047 [Capsicum annuum] diamond 117 48.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
27423334 27423334 PRJNA404067_P_NODE_31403_length_209_cov_0.864865_g31016_i0 PRJNA404067 31403 209 0.864865 1.80756785 Capsicum baccatum 33114 Plants Plants 46.2 7.56e-4   NR PHT41175.1 33114 g31016 i0 52 0.717703349282297 50 21 67.5 2 150 10 1 50 PHT41175.1 Tryptophan synthase alpha chain [Capsicum baccatum] diamond 150 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum baccatum
27423335 27423335 PRJNA404067_P_NODE_36543_length_203_cov_0.901408_g36156_i0 PRJNA404067 36543 203 0.901408 1.82985824 Sphagnum balticum 128184 Plants Plants 68.6 1.74e-12   NR CAM6030263.1 128184 g36156 i0 47.3 9.07389162561576 55 29 81.3 0 30 194 54 108 CAM6030263.1 unnamed protein product [Sphagnum balticum] diamond 1842 68.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Sphagnopsida Sphagnales Sphagnaceae Sphagnum Sphagnum balticum
27486248 27486248 PRJNA404067_P_NODE_30003_length_211_cov_1.800000_g29616_i0 PRJNA404067 30003 211 1.8 3.798 Papaver armeniacum 357465 Plants Plants 55.8 4.21e-8   NR KAI3932229.1 357465 g29616 i0 58.5 1.16587677725118 41 17 58.3 0 200 78 20 60 KAI3932229.1 hypothetical protein MKW92_021572, partial [Papaver armeniacum] diamond 246 55.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ranunculales Papaveraceae Papaver Papaver armeniacum
27644320 27644320 PRJNA404067_P_NODE_17844_length_246_cov_3.524324_g17457_i0 PRJNA404067 17844 246 3.524324 8.66983704 Ipomoea nil 35883 Plants Plants 46.2 0.00216   NR XP_019177289.1 35883 g17457 i0 40.6 1.68292682926829 69 39 84.1 1 223 17 238 304 XP_019177289.1 PREDICTED: uncharacterized protein LOC109172566 isoform X2 [Ipomoea nil] diamond 414 46.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Ipomoea Ipomoea nil
28260530 28260530 PRJNA404067_P_NODE_37166_length_202_cov_1.737589_g36779_i0 PRJNA404067 37166 202 1.737589 3.5099297800000002 Eukaryota 2759 Plants Plants 93.6 4.8700000000000005e-21   NR KAF7846358.1 360336 g36779 i0 63.6 1.96039603960396 66 24 98 0 3 200 226 291 KAF7846358.1 hypothetical protein BT93_L4503 [Corymbia citriodora subsp. variegata] diamond 396 94 0.995744680851064 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Myrtales Myrtaceae Corymbia Corymbia citriodora
28307183 28307183 PRJNA404067_P_NODE_35906_length_204_cov_0.832168_g35519_i0 PRJNA404067 35906 204 0.832168 1.69762272 Capsicum chinense 80379 Plants Plants 96.7 2.36e-21   NR PHU20002.1 80379 g35519 i0 66.2 0.955882352941177 65 22 95.6 0 204 10 636 700 PHU20002.1 Serine carboxypeptidase-like 41 [Capsicum chinense] diamond 195 96.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum chinense
28906831 28906831 PRJNA404067_P_NODE_16728_length_254_cov_2.917098_g16341_i0 PRJNA404067 16728 254 2.917098 7.40942892 Hordeum vulgare subsp. vulgare 112509 Plants Plants 66.6 1.63e-10   NR BAK00514.1 112509 g16341 i0 66.7 0.531496062992126 45 15 53.1 0 94 228 556 600 BAK00514.1 predicted protein [Hordeum vulgare subsp. vulgare] diamond 135 66.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Hordeum Hordeum vulgare
28970246 28970246 PRJNA404067_P_NODE_32488_length_207_cov_2.321918_g32101_i0 PRJNA404067 32488 207 2.321918 4.80637026 Capsicum annuum 4072 Plants Plants 62.4 2.76e-9   NR XP_047259759.1 4072 g32101 i0 70.7 0.594202898550725 41 12 59.4 0 49 171 169 209 XP_047259759.1 uncharacterized protein LOC124892528 [Capsicum annuum] diamond 123 62.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
29002202 29002202 PRJNA404067_P_NODE_13588_length_283_cov_1.572072_g13201_i0 PRJNA404067 13588 283 1.572072 4.44896376 Iris pallida 29817 Plants Plants 52 3.12e-5   NR KAJ6794991.1 29817 g13201 i0 30.4 0.837455830388693 79 55 83.7 0 240 4 15 93 KAJ6794991.1 Uncharacterized protein M6B38_228785 [Iris pallida] diamond 237 52 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Iridaceae Iris Iris pallida
29980688 29980688 PRJNA404067_P_NODE_16031_length_259_cov_1.565657_g15644_i0 PRJNA404067 16031 259 1.565657 4.05505163 Stylosanthes scabra 79078 Plants Plants 63.2 1.81e-10   NR MED6214258.1 79078 g15644 i0 75 0.787644787644788 68 10 70.7 2 185 3 1 68 MED6214258.1 hypothetical protein [Stylosanthes scabra] diamond 204 63.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Stylosanthes Stylosanthes scabra
30170076 30170076 PRJNA404067_P_NODE_31492_length_209_cov_0.864865_g31105_i0 PRJNA404067 31492 209 0.864865 1.80756785 Capsicum baccatum 33114 Plants Plants 41.2 0.0287   NR PHT45025.1 33114 g31105 i0 77.3 0.315789473684211 22 5 31.6 0 68 3 79 100 PHT45025.1 hypothetical protein CQW23_14183 [Capsicum baccatum] diamond 66 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum baccatum
30313832 30313832 PRJNA404067_P_NODE_19672_length_238_cov_1.016949_g19285_i0 PRJNA404067 19672 238 1.016949 2.42033862 root 1 Root_unresolved Root_unresolved 77.8 2.27e-15   NR KAH9306585.1 29808 g19285 i0 60.7 2.50840336134454 61 24 76.9 0 32 214 26 86 KAH9306585.1 hypothetical protein KI387_010989, partial [Taxus chinensis] diamond 597 77.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Taxaceae Taxus Taxus chinensis
30454922 30454922 PRJNA404067_P_NODE_33073_length_207_cov_0.876712_g32686_i0 PRJNA404067 33073 207 0.876712 1.81479384 Capsicum baccatum 33114 Plants Plants 103 9.329999999999999e-24   NR PHT36454.1 33114 g32686 i0 74.2 1.91304347826087 66 17 95.7 0 2 199 50 115 PHT36454.1 hypothetical protein CQW23_24154 [Capsicum baccatum] diamond 396 103 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum baccatum
30643986 30643986 PRJNA404067_P_NODE_31693_length_208_cov_2.034014_g31306_i0 PRJNA404067 31693 208 2.034014 4.23074912 Lolium multiflorum 4521 Plants Plants 84.3 8.13e-18   NR KAK1631292.1 4521 g31306 i0 66.2 0.9375 65 22 93.8 0 202 8 56 120 KAK1631292.1 hypothetical protein QYE76_005607 [Lolium multiflorum] diamond 195 84.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium multiflorum
30881960 30881960 PRJNA404067_P_NODE_31454_length_209_cov_0.864865_g31067_i0 PRJNA404067 31454 209 0.864865 1.80756785 Magnoliopsida 3398 Plants Plants 68.6 1.86e-11   NR XP_056695478.1 3562 g31067 i0 55.4 5.95693779904306 65 29 93.3 0 195 1 415 479 XP_056695478.1 uncharacterized protein LOC110779142 [Spinacia oleracea] diamond 1245 68.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Caryophyllales Chenopodiaceae Spinacia Spinacia oleracea
30960175 30960175 PRJNA404067_P_NODE_35474_length_204_cov_0.895105_g35087_i0 PRJNA404067 35474 204 0.895105 1.8260142 Daucus carota subsp. sativus 79200 Plants Plants 138 3.9999999999999994e-37   NR XP_063942867.1 79200 g35087 i0 89.7 7.98529411764706 68 7 100 0 1 204 322 389 XP_063942867.1 uncharacterized protein LOC135150479 [Daucus carota subsp. sativus] diamond 1629 138 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Daucus Daucus carota
31117835 31117835 PRJNA404067_P_NODE_37955_length_202_cov_0.865248_g37568_i0 PRJNA404067 37955 202 0.865248 1.74780096 Triticum aestivum 4565 Plants Plants 62 9.06e-10   NR XP_044453448.1 4565 g37568 i0 60 0.668316831683168 45 17 66.8 1 66 200 86 129 XP_044453448.1 rRNA 2'-O-methyltransferase fibrillarin-like [Triticum aestivum] diamond 135 62 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
31180935 31180935 PRJNA404067_P_NODE_20535_length_235_cov_1.258621_g20148_i0 PRJNA404067 20535 235 1.258621 2.95775935 Canavalia gladiata 3824 Plants Plants 55.8 3.37e-7   NR KAK7344270.1 3824 g20148 i0 74.2 1.94042553191489 31 8 39.6 0 79 171 163 193 KAK7344270.1 hypothetical protein VNO77_13699 [Canavalia gladiata] diamond 456 55.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Canavalia Canavalia gladiata
31197568 31197568 PRJNA404067_P_NODE_6355_length_495_cov_1.850230_g5979_i0 PRJNA404067 6355 495 1.85023 9.1586385 root 1 Root_unresolved Root_unresolved 101 1.63e-21   NR KAF3673651.1 4072 g5979 i0 67.1 1.72121212121212 70 23 42.4 0 224 15 965 1034 KAF3673651.1 putative ATP-dependent zinc metalloprotease FtsH-like isoform X1 [Capsicum annuum] diamond 852 101 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
32604644 32604644 PRJNA404067_P_NODE_29540_length_212_cov_1.675497_g29153_i0 PRJNA404067 29540 212 1.675497 3.55205364 Capsicum annuum 4072 Plants Plants 41.2 0.0416   NR KAF3660030.1 4072 g29153 i0 54.5 0.466981132075472 33 15 46.7 0 187 89 102 134 KAF3660030.1 hypothetical protein FXO38_12329 [Capsicum annuum] diamond 99 41.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Capsicum Capsicum annuum
32793309 32793309 PRJNA404067_P_NODE_17480_length_249_cov_1.095745_g17093_i0 PRJNA404067 17480 249 1.095745 2.72840505 Ficus carica 3494 Plants Plants 68.2 4.47e-11   NR GMN54865.1 3494 g17093 i0 71.7 3.32530120481928 46 11 55.4 1 140 3 1466 1509 GMN54865.1 hypothetical protein TIFTF001_023987 [Ficus carica] diamond 828 68.2 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Moraceae Ficus Ficus carica

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;