RNAquarium Metadata Server
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contig_metadata

10 rows where analysis = "diamond", bioproject = "PRJNA401346" and tax_phylum = "Heterolobosea"

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tax_superkingdom 1

tax_phylum 1

  • Heterolobosea · 10 ✖

tax_clade 1

bioproject 1

  • PRJNA401346 · 10 ✖

analysis 1

  • diamond · 10 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4241372 4241372 PRJNA401346_P_NODE_6244_length_209_cov_0.864865_g6223_i0 PRJNA401346 6244 209 0.864865 1.80756785 Acrasis kona 1008807 Heterolobosea other_Eukaryota 124 1.04e-31   NR KAL0488048.1 1008807 g6223 i0 88.4 1.98086124401914 69 8 99 0 209 3 343 411 KAL0488048.1 isocitrate dehydrogenase, mitochondrial [Acrasis kona] diamond 414 124 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
10618087 10618087 PRJNA401346_P_NODE_2029_length_348_cov_1.114983_g2008_i0 PRJNA401346 2029 348 1.114983 3.88014084 Acrasis kona 1008807 Heterolobosea other_Eukaryota 167 3.35e-50   NR KAL0478911.1 1008807 g2008 i0 65.2 0.991379310344828 115 40 99.1 0 346 2 36 150 KAL0478911.1 ribosomal protein L9 [Acrasis kona] diamond 345 167 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
10618161 10618161 PRJNA401346_P_NODE_4449_length_252_cov_1.460733_g4428_i0 PRJNA401346 4449 252 1.460733 3.68104716 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 99.4 1.97e-24   NR XP_044563356.1 5763 g4428 i0 68.8 1.89285714285714 80 24 94 1 238 2 1 80 XP_044563356.1 uncharacterized protein FDP41_002463 [Naegleria fowleri] diamond 477 100 0.994 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
19539963 19539963 PRJNA401346_P_NODE_2656_length_311_cov_1.004000_g2635_i0 PRJNA401346 2656 311 1.004 3.12244 Acrasis kona 1008807 Heterolobosea other_Eukaryota 187 2.71e-59   NR KAL0486015.1 1008807 g2635 i0 93.9 0.945337620578778 98 6 94.5 0 295 2 1 98 KAL0486015.1 ribosomal protein S26 [Acrasis kona] diamond 294 187 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
19540052 19540052 PRJNA401346_P_NODE_5856_length_217_cov_2.044872_g5835_i0 PRJNA401346 5856 217 2.044872 4.43737224 Acrasis kona 1008807 Heterolobosea other_Eukaryota 103 1.6e-26   NR KAL0487562.1 1008807 g5835 i0 78.1 0.884792626728111 64 14 88.5 0 193 2 1 64 KAL0487562.1 profilin [Acrasis kona] diamond 192 103 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
22090754 22090754 PRJNA401346_P_NODE_6378_length_209_cov_0.864865_g6357_i0 PRJNA401346 6378 209 0.864865 1.80756785 Acrasis kona 1008807 Heterolobosea other_Eukaryota 124 2.08e-34   NR KAL0479838.1 1008807 g6357 i0 92.6 0.976076555023923 68 5 97.6 0 208 5 89 156 KAL0479838.1 ribosomal protein S18 [Acrasis kona] diamond 204 124 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona
27597836 27597836 PRJNA401346_P_NODE_3344_length_284_cov_1.390135_g3323_i0 PRJNA401346 3344 284 1.390135 3.9479834 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 102 6.05e-25   NR XP_044562399.1 5763 g3323 i0 57.5 5.61971830985915 87 37 91.9 0 24 284 6 92 XP_044562399.1 uncharacterized protein FDP41_003008 [Naegleria fowleri] diamond 1596 103 0.990291262135922 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria fowleri
28370242 28370242 PRJNA401346_P_NODE_3266_length_287_cov_1.128319_g3245_i0 PRJNA401346 3266 287 1.128319 3.23827553 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 102 1.2499999999999999e-23   NR XP_002677623.1 5762 g3245 i0 48.5 1.05574912891986 101 45 98.3 1 282 1 159 259 XP_002677623.1 cathepsin B [Naegleria gruberi] diamond 303 102 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
28970235 28970235 PRJNA401346_P_NODE_7288_length_206_cov_0.882759_g7267_i0 PRJNA401346 7288 206 0.882759 1.81848354 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 113 2.6900000000000003e-27   NR XP_002675074.1 5762 g7267 i0 73.5 0.990291262135922 68 18 99 0 3 206 917 984 XP_002675074.1 uncharacterized protein NAEGRDRAFT_50569 [Naegleria gruberi] diamond 204 113 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
31624006 31624006 PRJNA401346_P_NODE_8856_length_201_cov_0.914286_g8835_i0 PRJNA401346 8856 201 0.914286 1.83771486 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 109 6.84e-26   NR XP_002678635.1 5762 g8835 i0 73.1 2 67 18 100 0 1 201 459 525 XP_002678635.1 asparaginyl-tRNA synthetase [Naegleria gruberi] diamond 402 109 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;