RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA400391" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA400391 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27864954 27864954 PRJNA400391_S_NODE_4605_length_186_cov_2.271523_g4544_i0 PRJNA400391 4605 186 2.271523 4.22503278 Linnemannia elongata AG-77 1314771 Fungi Fungi 42.7 0.00768   NR OAQ22279.1 1314771 g4544 i0 63.6 1.54838709677419 33 12 53.2 0 13 111 99 131 OAQ22279.1 hypothetical protein K457DRAFT_1887526 [Linnemannia elongata AG-77] diamond 288 42.7 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Linnemannia Linnemannia elongata
29601371 29601371 PRJNA400391_S_NODE_2230_length_267_cov_23.564655_g2169_i0 PRJNA400391 2230 267 23.564655 62.91762885 Diversispora epigaea 1348612 Fungi Fungi 56.6 2.56e-8   NR RHZ57888.1 1348612 g2169 i0 70 0.898876404494382 40 12 44.9 0 3 122 32 71 RHZ57888.1 hypothetical protein Glove_382g69 [Diversispora epigaea] diamond 240 56.6 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Diversisporales Diversisporaceae Diversispora Diversispora epigaea
30724002 30724002 PRJNA400391_S_NODE_5934_length_161_cov_1.484127_g5873_i0 PRJNA400391 5934 161 1.484127 2.38944447 Fungi 4751 Fungi Fungi 42 0.0225   NR CAG8642634.1 144538 g5873 i0 59.4 2.98136645962733 32 13 59.6 0 97 2 1 32 CAG8642634.1 3448_t:CDS:2 [Paraglomus brasilianum] diamond 480 42.4 0.990566037735849 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Paraglomerales Paraglomeraceae Paraglomus Paraglomus brasilianum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;