RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA400391" and tax_phylum = "Ascomycota"

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tax_superkingdom 1

tax_phylum 1

  • Ascomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA400391 · 2 ✖

analysis 1

  • diamond · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27787284 27787284 PRJNA400391_S_NODE_5564_length_167_cov_8.772727_g5503_i0 PRJNA400391 5564 167 8.772727 14.65045409 Eukaryota 2759 Fungi Fungi 49.3 5.46e-5   NR KAJ5195645.1 70096 g5503 i0 71 10.5808383233533 31 9 55.7 0 104 12 158 188 KAJ5195645.1 hypothetical protein N7498_009083 [Penicillium cinerascens] diamond 1767 49.3 1 Eukaryota Opisthokonta Fungi Ascomycota Eurotiomycetes Eurotiales Aspergillaceae Penicillium Penicillium cinerascens
28134563 28134563 PRJNA400391_S_NODE_5645_length_166_cov_1.366412_g5584_i0 PRJNA400391 5645 166 1.366412 2.26824392 Sordariomycetes 147550 Fungi Fungi 61.2 3.76e-9   NR KAL2268291.1 72144 g5584 i0 63.6 3.97590361445783 44 16 79.5 0 27 158 371 414 KAL2268291.1 hypothetical protein VTJ83DRAFT_3137 [Remersonia thermophila] diamond 660 61.2 1 Eukaryota Opisthokonta Fungi Ascomycota Sordariomycetes Sordariales   Remersonia Remersonia thermophila

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;