RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA399711" and tax_phylum = "Ciliophora"

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tax_superkingdom 1

tax_phylum 1

  • Ciliophora · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA399711 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25837703 25837703 PRJNA399711_S_NODE_99523_length_155_cov_3.271186_g99381_i0 PRJNA399711 99523 155 3.271186 5.0703383 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 82 3.01e-17   NR KRX09037.1 266149 g99381 i0 73.5 6.63870967741935 49 13 94.8 0 147 1 160 208 KRX09037.1 hypothetical protein PPERSA_01924 [Pseudocohnilembus persalinus] diamond 1029 82 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
33111816 33111816 PRJNA399711_S_NODE_38366_length_219_cov_2.978022_g38224_i0 PRJNA399711 38366 219 2.978022 6.52186818 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 101 1.92e-24   NR XP_004039566.1 5932 g38224 i0 94 5.47945205479452 50 3 68.5 0 2 151 200 249 XP_004039566.1 parkin co-regulated gene protein, putative [Ichthyophthirius multifiliis] diamond 1200 101 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;