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contig_metadata

24 rows where analysis = "diamond", bioproject = "PRJNA399711" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 24 ✖

bioproject 1

  • PRJNA399711 · 24 ✖

analysis 1

  • diamond · 24 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25699384 25699384 PRJNA399711_S_NODE_36762_length_222_cov_4.772973_g36620_i0 PRJNA399711 36762 222 4.772973 10.59600006 Trueperaceae bacterium 2026798 Bacteria Bacteria 129 4.62e-33   NR HEX7021565.1 2026798 g36620 i0 84.9 0.986486486486487 73 10 98.6 1 3 221 140 211 HEX7021565.1 biosynthetic-type acetolactate synthase large subunit [Trueperaceae bacterium] diamond 219 129 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
25834602 25834602 PRJNA399711_S_NODE_17939_length_286_cov_5.465863_g17797_i0 PRJNA399711 17939 286 5.465863 15.63236818 Trueperaceae bacterium 2026798 Bacteria Bacteria 114 9.36e-31   NR MCA9838640.1 2026798 g17797 i0 74.3 0.776223776223776 74 19 77.6 0 223 2 3 76 MCA9838640.1 PadR family transcriptional regulator [Trueperaceae bacterium] diamond 222 114 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
25896660 25896660 PRJNA399711_S_NODE_43899_length_209_cov_1.540698_g43757_i0 PRJNA399711 43899 209 1.540698 3.22005882 uncultured Deinococcus sp. 158789 Bacteria Bacteria 76.6 6.1e-15   NR WP_295817398.1 158789 g43757 i0 54.4 1.95215311004785 68 31 97.6 0 6 209 42 109 WP_295817398.1 SDR family oxidoreductase [uncultured Deinococcus sp.] diamond 408 76.6 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus uncultured Deinococcus sp.
25971965 25971965 PRJNA399711_S_NODE_41812_length_212_cov_5.280000_g41670_i0 PRJNA399711 41812 212 5.28 11.1936 Truepera radiovictrix 332249 Bacteria Bacteria 127 3.4499999999999995e-32   NR WP_013178083.1 332249 g41670 i0 91.3 0.976415094339623 69 6 97.6 0 5 211 301 369 WP_013178083.1 NAD-dependent DNA ligase LigA [Truepera radiovictrix] diamond 207 127 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
26242905 26242905 PRJNA399711_S_NODE_16398_length_295_cov_2.914729_g16256_i0 PRJNA399711 16398 295 2.914729 8.59845055 Truepera radiovictrix 332249 Bacteria Bacteria 166 1.28e-48   NR WP_013179236.1 332249 g16256 i0 83.3 1.95254237288136 96 16 97.6 0 290 3 33 128 WP_013179236.1 SDR family oxidoreductase [Truepera radiovictrix] diamond 576 166 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
26380603 26380603 PRJNA399711_S_NODE_59607_length_187_cov_1.893333_g59465_i0 PRJNA399711 59607 187 1.893333 3.54053271 Truepera radiovictrix 332249 Bacteria Bacteria 75.5 5.09e-14   NR WP_013176772.1 332249 g59465 i0 90 0.641711229946524 40 4 64.2 0 2 121 607 646 WP_013176772.1 acetate--CoA ligase [Truepera radiovictrix] diamond 120 75.5 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
26381835 26381835 PRJNA399711_S_NODE_96375_length_157_cov_2.500000_g96233_i0 PRJNA399711 96375 157 2.5 3.925 Allomeiothermus silvanus 52022 Bacteria Bacteria 101 4.87e-24   NR WP_276955146.1 52022 g96233 i0 100 0.993630573248408 52 0 99.4 0 1 156 245 296 WP_276955146.1 ROK family protein [Allomeiothermus silvanus] diamond 156 101 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Allomeiothermus Allomeiothermus silvanus
32917335 32917335 PRJNA399711_S_NODE_101017_length_154_cov_4.649573_g100875_i0 PRJNA399711 101017 154 4.649573 7.16034242 Truepera radiovictrix 332249 Bacteria Bacteria 86.3 3.44e-18   NR WP_013178762.1 332249 g100875 i0 83.7 0.954545454545455 49 8 95.5 0 3 149 254 302 WP_013178762.1 ABC transporter permease [Truepera radiovictrix] diamond 147 86.3 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
32917799 32917799 PRJNA399711_S_NODE_69057_length_177_cov_2.764286_g68915_i0 PRJNA399711 69057 177 2.764286 4.89278622 Truepera radiovictrix 332249 Bacteria Bacteria 105 9.21e-25   NR WP_013176600.1 332249 g68915 i0 86.4 1 59 8 100 0 177 1 790 848 WP_013176600.1 intein-containing adenosylcobalamin-dependent ribonucleoside-diphosphate reductase [Truepera radiovictrix] diamond 177 105 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
32934576 32934576 PRJNA399711_S_NODE_13537_length_314_cov_3.620939_g13395_i0 PRJNA399711 13537 314 3.620939 11.36974846 Trueperaceae bacterium 2026798 Bacteria Bacteria 57 4.66e-8   NR HEX7023052.1 2026798 g13395 i0 76.5 0.955414012738854 34 8 32.5 0 211 312 1 34 HEX7023052.1 FmdB family transcriptional regulator [Trueperaceae bacterium] diamond 300 57 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
32934911 32934911 PRJNA399711_S_NODE_61977_length_184_cov_3.687075_g61835_i0 PRJNA399711 61977 184 3.687075 6.784218 Truepera radiovictrix 332249 Bacteria Bacteria 114 2.37e-28   NR WP_013179336.1 332249 g61835 i0 88.3 0.978260869565217 60 7 97.8 0 182 3 68 127 WP_013179336.1 extracellular solute-binding protein [Truepera radiovictrix] diamond 180 114 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
32934991 32934991 PRJNA399711_S_NODE_75577_length_171_cov_4.917910_g75435_i0 PRJNA399711 75577 171 4.91791 8.4096261 Deinococcus aestuarii 2774531 Bacteria Bacteria 69.7 7.53e-13   NR WP_216326522.1 2774531 g75435 i0 76.1 0.807017543859649 46 10 78.9 1 169 35 149 194 WP_216326522.1 DUF421 domain-containing protein [Deinococcus aestuarii] diamond 138 69.7 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aestuarii
32941272 32941272 PRJNA399711_S_NODE_31849_length_233_cov_36.198980_g31707_i0 PRJNA399711 31849 233 36.19898 84.3436234 Bacteria 2 Bacteria Bacteria 97.8 6.779999999999998e-24   NR MEY4531883.1 1913990 g31707 i0 53.3 5.81974248927039 75 35 96.6 0 8 232 42 116 MEY4531883.1 hypothetical protein [Deinococcota bacterium] diamond 1356 98.2 0.995926680244399 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
32958375 32958375 PRJNA399711_S_NODE_103882_length_153_cov_1.603448_g103740_i0 PRJNA399711 103882 153 1.603448 2.45327544 Bacteria 2 Bacteria Bacteria 113 1.68e-27   NR 1TAQ_A 271 g103740 i0 98 4.90196078431373 50 1 98 0 152 3 147 196 1TAQ_A Chain A, TAQ DNA POLYMERASE [Thermus aquaticus] diamond 750 113 1 Bacteria   Thermotogati Deinococcota Deinococci Thermales Thermaceae Thermus Thermus aquaticus
33043630 33043630 PRJNA399711_S_NODE_11556_length_330_cov_5.986348_g11414_i0 PRJNA399711 11556 330 5.986348 19.7549484 Bacteria 2 Bacteria Bacteria 164 4.7199999999999997e-48   NR UCH26029.1 2026798 g11414 i0 72.4 2.86363636363636 105 28 94.5 1 328 17 165 269 UCH26029.1 MAG: ABC-2 family transporter protein [Trueperaceae bacterium] diamond 945 164 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae   Trueperaceae bacterium
33054383 33054383 PRJNA399711_S_NODE_56013_length_191_cov_2.792208_g55871_i0 PRJNA399711 56013 191 2.792208 5.33311728 Deinococcota bacterium 1913990 Bacteria Bacteria 61.6 1.53e-9   NR MDQ3459793.1 1913990 g55871 i0 79.4 0.534031413612565 34 7 53.4 0 1 102 172 205 MDQ3459793.1 HD domain-containing protein [Deinococcota bacterium] diamond 102 61.6 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
33054397 33054397 PRJNA399711_S_NODE_58293_length_188_cov_4.390728_g58151_i0 PRJNA399711 58293 188 4.390728 8.25456864 Deinococcus aquatilis 519440 Bacteria Bacteria 125 1.02e-31   NR WP_019008563.1 519440 g58151 i0 96.8 0.98936170212766 62 2 98.9 0 2 187 510 571 WP_019008563.1 hypothetical protein [Deinococcus aquatilis] diamond 186 125 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus aquatilis
33105442 33105442 PRJNA399711_S_NODE_31278_length_235_cov_6.616162_g31136_i0 PRJNA399711 31278 235 6.616162 15.5479807 Truepera sp. 2478917 Bacteria Bacteria 54.7 4.15e-7   NR MBS3967573.1 2478917 g31136 i0 50 0.638297872340426 50 25 63.8 0 153 4 31 80 MBS3967573.1 helix-turn-helix domain-containing protein [Truepera sp.] diamond 150 54.7 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera sp.
33105506 33105506 PRJNA399711_S_NODE_39710_length_216_cov_6.977654_g39568_i0 PRJNA399711 39710 216 6.977654 15.07173264 Truepera radiovictrix 332249 Bacteria Bacteria 112 2.84e-28   NR WP_013177333.1 332249 g39568 i0 76.1 0.986111111111111 71 17 98.6 0 214 2 40 110 WP_013177333.1 transglutaminase family protein [Truepera radiovictrix] diamond 213 112 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
33105719 33105719 PRJNA399711_S_NODE_74910_length_172_cov_1.977778_g74768_i0 PRJNA399711 74910 172 1.977778 3.40177816 Deinococcus cellulosilyticus 401558 Bacteria Bacteria 43.9 0.00566   NR WP_146882752.1 401558 g74768 i0 42.6 0.819767441860465 47 24 82 1 147 7 51 94 WP_146882752.1 ABC transporter permease [Deinococcus cellulosilyticus] diamond 141 43.9 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus cellulosilyticus
33139779 33139779 PRJNA399711_S_NODE_69183_length_177_cov_2.228571_g69041_i0 PRJNA399711 69183 177 2.228571 3.94457067 Deinococcota bacterium 1913990 Bacteria Bacteria 42.7 0.0152   NR MEM7738740.1 1913990 g69041 i0 62.1 1.25423728813559 29 11 49.2 0 44 130 431 459 MEM7738740.1 hypothetical protein [Deinococcota bacterium] diamond 222 42.7 1 Bacteria   Thermotogati Deinococcota         Deinococcota bacterium
33156341 33156341 PRJNA399711_S_NODE_109088_length_150_cov_3.327434_g108946_i0 PRJNA399711 109088 150 3.327434 4.991151 uncultured Truepera sp. 543023 Bacteria Bacteria 53.9 8.36e-7   NR CAA9568480.1 543023 g108946 i0 73 0.74 37 10 74 0 38 148 1 37 CAA9568480.1 MAG: Uridine monophosphate kinase [uncultured Truepera sp.] diamond 111 53.9 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera uncultured Truepera sp.
33173793 33173793 PRJNA399711_S_NODE_35728_length_224_cov_5.593583_g35586_i0 PRJNA399711 35728 224 5.593583 12.52962592 Truepera radiovictrix 332249 Bacteria Bacteria 134 1.43e-36   NR WP_041947334.1 332249 g35586 i0 93.2 0.991071428571429 74 5 99.1 0 2 223 184 257 WP_041947334.1 carbohydrate ABC transporter permease [Truepera radiovictrix] diamond 222 134 1 Bacteria   Thermotogati Deinococcota Deinococci Trueperales Trueperaceae Truepera Truepera radiovictrix
33174008 33174008 PRJNA399711_S_NODE_68520_length_177_cov_8.685714_g68378_i0 PRJNA399711 68520 177 8.685714 15.37371378 Thermotogota bacterium 2053689 Bacteria Bacteria 41.6 0.0147   NR HPR96506.1 2053689 g68378 i0 51.5 0.559322033898305 33 15 55.9 1 31 129 52 83 HPR96506.1 hypothetical protein [Thermotogota bacterium] diamond 99 41.6 1 Bacteria   Thermotogati Thermotogota         Thermotogota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;