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contig_metadata

7 rows where analysis = "diamond", bioproject = "PRJNA399711" and tax_kingdom = "Thermoproteati"

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tax_superkingdom 1

tax_kingdom 1

  • Thermoproteati · 7 ✖

bioproject 1

  • PRJNA399711 · 7 ✖

analysis 1

  • diamond · 7 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30454888 30454888 PRJNA399711_P_NODE_11633_length_188_cov_2.860927_g11567_i0 PRJNA399711 11633 188 2.860927 5.37854276 Candidatus Methanomethylicaceae archaeon 2282146 Archaea Archaea 42 0.0335   NR MEM2001436.1 3058293 g11567 i0 50 0.51063829787234 32 16 51.1 0 7 102 100 131 MEM2001436.1 glycosyltransferase [Candidatus Methanomethylicaceae archaeon] diamond 96 42 1 Archaea   Thermoproteati Candidatus Methanomethylicota Candidatus Methanomethylicia Candidatus Methanomethylicales Candidatus Methanomethylicaceae   Candidatus Methanomethylicaceae archaeon
30675569 30675569 PRJNA399711_P_NODE_18793_length_166_cov_2.325581_g18727_i0 PRJNA399711 18793 166 2.325581 3.86046446 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 93.6 5.779999999999999e-23   NR MCJ7636226.1 2169593 g18727 i0 96 1.80722891566265 50 2 90.4 0 2 151 33 82 MCJ7636226.1 hypothetical protein [Nitrososphaeraceae archaeon] diamond 300 93.6 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33003391 33003391 PRJNA399711_S_NODE_82699_length_166_cov_2.364341_g82557_i0 PRJNA399711 82699 166 2.364341 3.92480606 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 117 7.240000000000001e-29   NR HET8793525.1 2169593 g82557 i0 94.5 11.9277108433735 55 3 99.4 0 166 2 461 515 HET8793525.1 ABC transporter substrate-binding protein [Nitrososphaeraceae archaeon] diamond 1980 117 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33020184 33020184 PRJNA399711_S_NODE_44428_length_208_cov_1.777778_g44286_i0 PRJNA399711 44428 208 1.777778 3.69777824 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 123 1.9099999999999998e-31   NR MDW0258915.1 2169593 g44286 i0 100 0.995192307692308 69 0 99.5 0 207 1 256 324 MDW0258915.1 IS1634 family transposase [Nitrososphaeraceae archaeon] diamond 207 123 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33054534 33054534 PRJNA399711_S_NODE_81637_length_167_cov_1.161538_g81495_i0 PRJNA399711 81637 167 1.161538 1.93976846 Nitrosopumilaceae archaeon 2202732 Archaea Archaea 67.4 1.5e-11   NR NIU02294.1 2202732 g81495 i0 58.5 0.952095808383233 53 22 95.2 0 165 7 75 127 NIU02294.1 hypothetical protein [Nitrosopumilaceae archaeon] diamond 159 67.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrosopumilales Nitrosopumilaceae   Nitrosopumilaceae archaeon
33088812 33088812 PRJNA399711_S_NODE_96982_length_157_cov_0.941667_g96840_i0 PRJNA399711 96982 157 0.941667 1.47841719 Nitrososphaeraceae archaeon 2169593 Archaea Archaea 87.4 6.4e-19   NR HEX6671336.1 2169593 g96840 i0 76.5 0.974522292993631 51 12 97.5 0 155 3 159 209 HEX6671336.1 site-specific integrase [Nitrososphaeraceae archaeon] diamond 153 87.4 1 Archaea   Thermoproteati Nitrososphaerota Nitrososphaeria Nitrososphaerales Nitrososphaeraceae   Nitrososphaeraceae archaeon
33111895 33111895 PRJNA399711_S_NODE_84534_length_164_cov_14.062992_g84392_i0 PRJNA399711 84534 164 14.062992 23.06330688 Thermoproteati 1783275 Archaea Archaea 111 7.77e-28   NR MDP9305080.1 2056631 g84392 i0 100 3.95121951219512 54 0 98.8 0 1 162 68 121 MDP9305080.1 isocitrate/isopropylmalate dehydrogenase family protein [Thermoproteota archaeon] diamond 648 111 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;