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contig_metadata

15 rows where analysis = "diamond", bioproject = "PRJNA399711" and tax_clade = "Sar"

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tax_superkingdom 1

tax_clade 1

  • Sar · 15 ✖

bioproject 1

  • PRJNA399711 · 15 ✖

analysis 1

  • diamond · 15 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25837703 25837703 PRJNA399711_S_NODE_99523_length_155_cov_3.271186_g99381_i0 PRJNA399711 99523 155 3.271186 5.0703383 Pseudocohnilembus persalinus 266149 SAR_Eukaryotes SAR_Eukaryotes 82 3.01e-17   NR KRX09037.1 266149 g99381 i0 73.5 6.63870967741935 49 13 94.8 0 147 1 160 208 KRX09037.1 hypothetical protein PPERSA_01924 [Pseudocohnilembus persalinus] diamond 1029 82 1 Eukaryota Sar   Ciliophora Oligohymenophorea Philasterida Pseudocohnilembidae Pseudocohnilembus Pseudocohnilembus persalinus
32951965 32951965 PRJNA399711_S_NODE_34074_length_228_cov_4.476440_g33932_i0 PRJNA399711 34074 228 4.47644 10.2062832 Vaucheria litorea 109269 SAR_Eukaryotes SAR_Eukaryotes 110 1.39e-28   NR YP_002327517.1 109269 g33932 i0 80.3 1.85526315789474 71 14 93.4 0 1 213 119 189 YP_002327517.1 ribosomal protein S5 [Vaucheria litorea] diamond 423 110 1 Eukaryota Sar     Xanthophyceae Vaucheriales Vaucheriaceae Vaucheria Vaucheria litorea
32951985 32951985 PRJNA399711_S_NODE_3770_length_465_cov_6.943925_g3637_i0 PRJNA399711 3770 465 6.943925 32.28925125 Triparma laevis f. longispina 1714387 SAR_Eukaryotes SAR_Eukaryotes 65.5 1.49e-10   NR GMH75098.1 1714387 g3637 i0 60.6 0.67741935483871 66 21 39.4 2 3 185 26 91 GMH75098.1 hypothetical protein TrLO_g12819 [Triparma laevis f. longispina] diamond 315 65.5 1 Eukaryota Sar     Bolidophyceae Parmales Triparmaceae Triparma Triparma laevis
32969315 32969315 PRJNA399711_S_NODE_58066_length_188_cov_8.768212_g57924_i0 PRJNA399711 58066 188 8.768212 16.48423856 Durusdinium trenchii 1381693 SAR_Eukaryotes SAR_Eukaryotes 57.4 3.64e-8   NR CAK9111081.1 1381693 g57924 i0 89.3 1.38829787234043 28 3 44.7 0 186 103 110 137 CAK9111081.1 FK506-binding protein 59 (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (dFKBP59) [Durusdinium trenchii] diamond 261 57.4 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Durusdinium Durusdinium trenchii
32969403 32969403 PRJNA399711_S_NODE_75746_length_171_cov_3.791045_g75604_i0 PRJNA399711 75746 171 3.791045 6.48268695 Ochromonadaceae sp. CCMP2298 483371 SAR_Eukaryotes SAR_Eukaryotes 51.6 1.03e-5   NR KAJ1426575.1 483371 g75604 i0 49 0.894736842105263 51 22 89.5 1 18 170 448 494 KAJ1426575.1 Sodium/calcium exchanger protein-domain-containing protein [Ochromonadaceae sp. CCMP2298] diamond 153 51.6 1 Eukaryota Sar     Synurophyceae Ochromonadales Ochromonadaceae   Ochromonadaceae sp. CCMP2298
33020368 33020368 PRJNA399711_S_NODE_73732_length_173_cov_2.110294_g73590_i0 PRJNA399711 73732 173 2.110294 3.65080862 Perkinsus olseni 32597 SAR_Eukaryotes SAR_Eukaryotes 67.4 5.38e-12   NR KAF4718031.1 32597 g73590 i0 75 3.06936416184971 44 10 76.3 1 172 41 145 187 KAF4718031.1 40S ribosomal protein S9 [Perkinsus olseni] diamond 531 67.4 1 Eukaryota Sar   Perkinsozoa   Perkinsida Perkinsidae Perkinsus Perkinsus olseni
33060659 33060659 PRJNA399711_S_NODE_42085_length_212_cov_2.034286_g41943_i0 PRJNA399711 42085 212 2.034286 4.31268632 Rhodophyta 2763 SAR_Eukaryotes SAR_Eukaryotes 62 3.52e-9   NR CAK0816265.1 89957 g41943 i0 54 2.09433962264151 50 23 70.8 0 3 152 274 323 CAK0816265.1 unnamed protein product [Polarella glacialis] diamond 444 62.4 0.993589743589744 Eukaryota Sar     Dinophyceae Suessiales Suessiaceae Polarella Polarella glacialis
33071264 33071264 PRJNA399711_S_NODE_39253_length_217_cov_5.683333_g39111_i0 PRJNA399711 39253 217 5.683333 12.33283261 Skeletonema marinoi 267567 SAR_Eukaryotes SAR_Eukaryotes 74.7 1.02e-13   NR KAK1746487.1 267567 g39111 i0 67.3 0.67741935483871 49 16 67.7 0 217 71 297 345 KAK1746487.1 transaldolase [Skeletonema marinoi] diamond 147 74.7 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Thalassiosirales Skeletonemataceae Skeletonema Skeletonema marinoi
33071268 33071268 PRJNA399711_S_NODE_39589_length_216_cov_24.134078_g39447_i0 PRJNA399711 39589 216 24.134078 52.12960848 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 54.7 3.31e-7   NR GBG30880.1 2315210 g39447 i0 92.6 0.75 27 2 37.5 0 3 83 116 142 GBG30880.1 40S ribosomal protein S12 [Hondaea fermentalgiana] diamond 162 54.7 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
33088425 33088425 PRJNA399711_S_NODE_39502_length_217_cov_2.083333_g39360_i0 PRJNA399711 39502 217 2.083333 4.52083261 Pythium insidiosum 114742 SAR_Eukaryotes SAR_Eukaryotes 106 1.06e-24   NR KAJ0412831.1 114742 g39360 i0 69.2 3.59447004608295 65 20 89.9 0 2 196 527 591 KAJ0412831.1 hypothetical protein ATCC90586_002461 [Pythium insidiosum] diamond 780 106 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
33088607 33088607 PRJNA399711_S_NODE_63118_length_183_cov_2.273973_g62976_i0 PRJNA399711 63118 183 2.273973 4.16137059 Plasmodiophora brassicae 37360 SAR_Eukaryotes SAR_Eukaryotes 58.2 6.15e-8   NR CEO97302.1 37360 g62976 i0 62.5 2.0655737704918 40 15 65.6 0 19 138 382 421 CEO97302.1 hypothetical protein PBRA_000647, partial [Plasmodiophora brassicae] diamond 378 58.2 1 Eukaryota Sar   Endomyxa Phytomyxea Plasmodiophorida Plasmodiophoridae Plasmodiophora Plasmodiophora brassicae
33105298 33105298 PRJNA399711_S_NODE_109966_length_150_cov_1.371681_g109824_i0 PRJNA399711 109966 150 1.371681 2.0575215 Chaetoceros tenuissimus 426638 SAR_Eukaryotes SAR_Eukaryotes 61.2 8.99e-10   NR GFH49172.1 426638 g109824 i0 73.5 1.96 49 13 98 0 2 148 139 187 GFH49172.1 hypothetical protein CTEN210_05648 [Chaetoceros tenuissimus] diamond 294 61.2 1 Eukaryota Sar   Bacillariophyta Coscinodiscophyceae Chaetocerotales Chaetocerotaceae Chaetoceros Chaetoceros tenuissimus
33111816 33111816 PRJNA399711_S_NODE_38366_length_219_cov_2.978022_g38224_i0 PRJNA399711 38366 219 2.978022 6.52186818 Ciliophora 5878 SAR_Eukaryotes SAR_Eukaryotes 101 1.92e-24   NR XP_004039566.1 5932 g38224 i0 94 5.47945205479452 50 3 68.5 0 2 151 200 249 XP_004039566.1 parkin co-regulated gene protein, putative [Ichthyophthirius multifiliis] diamond 1200 101 1 Eukaryota Sar   Ciliophora Oligohymenophorea Hymenostomatida   Ichthyophthirius Ichthyophthirius multifiliis
33122505 33122505 PRJNA399711_S_NODE_35455_length_225_cov_2.648936_g35313_i0 PRJNA399711 35455 225 2.648936 5.960106 Hondaea fermentalgiana 2315210 SAR_Eukaryotes SAR_Eukaryotes 47 9.2e-4   NR GBG24970.1 2315210 g35313 i0 45.3 0.706666666666667 53 29 70.7 0 221 63 316 368 GBG24970.1 TLD domain-containing protein 1 [Hondaea fermentalgiana] diamond 159 47 1 Eukaryota Sar     Bigyra Thraustochytrida Thraustochytriidae Hondaea Hondaea fermentalgiana
33139817 33139817 PRJNA399711_S_NODE_74567_length_172_cov_3.377778_g74425_i0 PRJNA399711 74567 172 3.377778 5.80977816 Symbiodinium natans 878477 SAR_Eukaryotes SAR_Eukaryotes 43.1 0.0108   NR CAE7489168.1 878477 g74425 i0 33.3 2.98255813953488 57 38 99.4 0 2 172 116 172 CAE7489168.1 GIP [Symbiodinium natans] diamond 513 43.1 1 Eukaryota Sar     Dinophyceae Suessiales Symbiodiniaceae Symbiodinium Symbiodinium natans

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;