RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA399711" and tax_clade = "Nitrospinota/Tectimicrobiota group"

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tax_superkingdom 1

tax_kingdom 1

tax_clade 1

  • Nitrospinota/Tectimicrobiota group · 3 ✖

bioproject 1

  • PRJNA399711 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
32478478 32478478 PRJNA399711_P_NODE_3779_length_259_cov_19.243243_g3713_i0 PRJNA399711 3779 259 19.243243 49.83999937 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 173 1.43e-50   NR HTG51431.1 2528274 g3713 i0 98.8 0.996138996138996 86 1 99.6 0 1 258 287 372 HTG51431.1 phosphoribosylamine--glycine ligase [Candidatus Tectimicrobiota bacterium] diamond 258 173 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32934948 32934948 PRJNA399711_S_NODE_68057_length_178_cov_2.482270_g67915_i0 PRJNA399711 68057 178 2.48227 4.4184406 Candidatus Tectimicrobiota bacterium 2528274 Bacteria Bacteria 42 0.0282   NR MDQ3829015.1 2528274 g67915 i0 46.3 0.910112359550562 54 25 86 2 24 176 82 134 MDQ3829015.1 DUF3854 domain-containing protein [Candidatus Tectimicrobiota bacterium] diamond 162 42 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Candidatus Tectimicrobiota         Candidatus Tectimicrobiota bacterium
32941360 32941360 PRJNA399711_S_NODE_81137_length_167_cov_2.892308_g80995_i0 PRJNA399711 81137 167 2.892308 4.83015436 Pseudomonadati 3379134 Bacteria Bacteria 51.6 2.42e-6   NR HIJ51003.1 2026769 g80995 i0 53.5 3.80838323353293 43 20 77.2 0 131 3 78 120 HIJ51003.1 AAA family ATPase [Nitrospinota bacterium] diamond 636 51.6 1 Bacteria Nitrospinota/Tectimicrobiota group Pseudomonadati Nitrospinota         Nitrospinota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;