RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA399711" and tax_clade = "Amoebozoa"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 28 ✖

bioproject 1

  • PRJNA399711 · 28 ✖

analysis 1

  • diamond · 28 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
25698616 25698616 PRJNA399711_S_NODE_20242_length_274_cov_7.464135_g20100_i0 PRJNA399711 20242 274 7.464135 20.4517299 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 114 7.489999999999999e-30   NR PRP79838.1 1890364 g20100 i0 77.8 2.28832116788321 72 14 78.8 1 272 57 94 163 PRP79838.1 60S ribosomal protein L44-like [Planoprotostelium fungivorum] diamond 627 114 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32934889 32934889 PRJNA399711_S_NODE_57625_length_189_cov_2.907895_g57483_i0 PRJNA399711 57625 189 2.907895 5.49592155 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 62 2.97e-9   NR XP_004333337.1 1257118 g57483 i0 53.8 1.03174603174603 65 22 90.5 1 189 19 578 642 XP_004333337.1 ABC transporter A family protein [Acanthamoeba castellanii str. Neff] diamond 195 62 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32941347 32941347 PRJNA399711_S_NODE_71345_length_175_cov_2.268116_g71203_i0 PRJNA399711 71345 175 2.268116 3.969203 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 51.2 3.39e-6   NR KAF2074912.1 133409 g71203 i0 51.1 7.33714285714286 47 22 78.9 1 4 141 75 121 KAF2074912.1 hypothetical protein CYY_003789 [Polysphondylium violaceum] diamond 1284 51.6 0.992248062015504 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Polysphondylium Polysphondylium violaceum
32952132 32952132 PRJNA399711_S_NODE_57234_length_189_cov_8.236842_g57092_i0 PRJNA399711 57234 189 8.236842 15.56763138 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 52 8.76e-6   NR PRP81122.1 1890364 g57092 i0 49.1 1.85714285714286 57 29 90.5 0 188 18 226 282 PRP81122.1 60S ribosomal protein L7a [Planoprotostelium fungivorum] diamond 351 52 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32952292 32952292 PRJNA399711_S_NODE_83162_length_165_cov_19.585938_g83020_i0 PRJNA399711 83162 165 19.585938 32.3167977 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 88.2 2.58e-19   NR PRP82690.1 1890364 g83020 i0 70.6 0.927272727272727 51 15 92.7 0 165 13 234 284 PRP82690.1 hypothetical protein PROFUN_10054 [Planoprotostelium fungivorum] diamond 153 88.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32969265 32969265 PRJNA399711_S_NODE_50746_length_198_cov_2.801242_g50604_i0 PRJNA399711 50746 198 2.801242 5.54645916 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 59.3 3e-8   NR KYR02009.1 361077 g50604 i0 61.5 0.590909090909091 39 15 59.1 0 31 147 623 661 KYR02009.1 sphingosine kinase related protein [Tieghemostelium lacteum] diamond 117 59.3 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
32969357 32969357 PRJNA399711_S_NODE_6610_length_393_cov_1.949438_g6468_i0 PRJNA399711 6610 393 1.949438 7.66129134 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 139 1.34e-37   NR XP_004340902.1 1257118 g6468 i0 55.1 1.91603053435115 127 57 96.9 0 2 382 141 267 XP_004340902.1 GNS1/SUR4 family protein [Acanthamoeba castellanii str. Neff] diamond 753 139 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
32986029 32986029 PRJNA399711_S_NODE_21979_length_266_cov_7.602620_g21837_i0 PRJNA399711 21979 266 7.60262 20.2229692 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 87.4 7.01e-19   NR PRP87986.1 1890364 g21837 i0 64.4 0.665413533834586 59 21 66.5 0 259 83 165 223 PRP87986.1 hypothetical protein PROFUN_02723 [Planoprotostelium fungivorum] diamond 177 87.4 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32986059 32986059 PRJNA399711_S_NODE_24371_length_257_cov_4.659091_g24229_i0 PRJNA399711 24371 257 4.659091 11.97386387 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 132 5.39e-34   NR PRP79170.1 1890364 g24229 i0 72.9 1.98443579766537 85 23 99.2 0 2 256 517 601 PRP79170.1 hypothetical protein PROFUN_13050 [Planoprotostelium fungivorum] diamond 510 132 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32992524 32992524 PRJNA399711_S_NODE_12403_length_323_cov_4.723776_g12261_i0 PRJNA399711 12403 323 4.723776 15.25779648 Evosea 2605435 Evosea other_Eukaryota 85.5 9.35e-17   NR XP_004350707.1 261658 g12261 i0 44.7 3.13003095975232 85 47 78.9 0 322 68 615 699 XP_004350707.1 uncharacterized protein DFA_11760 [Cavenderia fasciculata] diamond 1011 85.5 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33003372 33003372 PRJNA399711_S_NODE_77907_length_169_cov_7.962121_g77765_i0 PRJNA399711 77907 169 7.962121 13.45598449 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 72 1.81e-13   NR PRP88321.1 1890364 g77765 i0 67.3 0.869822485207101 49 16 87 0 4 150 186 234 PRP88321.1 vacuolar H+-ATPase E subunit [Planoprotostelium fungivorum] diamond 147 72 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33019954 33019954 PRJNA399711_S_NODE_110028_length_150_cov_1.327434_g109886_i0 PRJNA399711 110028 150 1.327434 1.991151 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 52.8 3.11e-6   NR PRP74428.1 1890364 g109886 i0 57.1 0.98 49 19 98 1 147 1 530 576 PRP74428.1 hypothetical protein PROFUN_06557 [Planoprotostelium fungivorum] diamond 147 52.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33020263 33020263 PRJNA399711_S_NODE_57204_length_189_cov_9.256579_g57062_i0 PRJNA399711 57204 189 9.256579 17.49493431 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 45.8 2.59e-4   NR XP_004353541.1 1257118 g57062 i0 48.7 0.619047619047619 39 20 61.9 0 185 69 56 94 XP_004353541.1 uncharacterized protein ACA1_144040 [Acanthamoeba castellanii str. Neff] diamond 117 45.8 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33020271 33020271 PRJNA399711_S_NODE_58932_length_187_cov_9.053333_g58790_i0 PRJNA399711 58932 187 9.053333 16.92973271 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 89 5.31e-19   NR XP_004341646.1 1257118 g58790 i0 64.3 1.74866310160428 56 20 89.8 0 184 17 330 385 XP_004341646.1 papain family cysteine protease containing protein [Acanthamoeba castellanii str. Neff] diamond 327 89 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33037470 33037470 PRJNA399711_S_NODE_75244_length_171_cov_15.089552_g75102_i0 PRJNA399711 75244 171 15.089552 25.80313392 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 72 6.83e-13   NR PRP85070.1 1890364 g75102 i0 58.8 0.894736842105263 51 21 89.5 0 7 159 613 663 PRP85070.1 hypothetical protein PROFUN_07254 [Planoprotostelium fungivorum] diamond 153 72 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33037519 33037519 PRJNA399711_S_NODE_8300_length_366_cov_28.495441_g8158_i0 PRJNA399711 8300 366 28.495441 104.29331406 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 86.7 6.45e-17   NR PRP78442.1 1890364 g8158 i0 49.5 0.745901639344262 91 46 74.6 0 362 90 1205 1295 PRP78442.1 snoRNP pseudouridylase box H/ACA snoRNP complex protein Gar1 [Planoprotostelium fungivorum] diamond 273 86.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33054281 33054281 PRJNA399711_S_NODE_38533_length_218_cov_28.961326_g38391_i0 PRJNA399711 38533 218 28.961326 63.13569068 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 59.7 2.8e-9   NR XP_012752736.1 1410327 g38391 i0 74.3 0.481651376146789 35 9 48.2 0 217 113 91 125 XP_012752736.1 hypothetical protein SAMD00019534_075850 [Acytostelium subglobosum LB1] diamond 105 59.7 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
33054283 33054283 PRJNA399711_S_NODE_38773_length_218_cov_4.801105_g38631_i0 PRJNA399711 38773 218 4.801105 10.4664089 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 43.9 0.00875   NR XP_004353046.1 1257118 g38631 i0 41.8 0.922018348623853 67 34 89.4 2 4 198 100 163 XP_004353046.1 uncharacterized protein ACA1_071400 [Acanthamoeba castellanii str. Neff] diamond 201 43.9 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33054411 33054411 PRJNA399711_S_NODE_60405_length_186_cov_2.369128_g60263_i0 PRJNA399711 60405 186 2.369128 4.40657808 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 50.1 4.22e-5   NR XP_004344777.1 1257118 g60263 i0 48.1 0.870967741935484 54 28 87.1 0 186 25 198 251 XP_004344777.1 Hypothetical protein ACA1_281280 [Acanthamoeba castellanii str. Neff] diamond 162 50.1 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33054473 33054473 PRJNA399711_S_NODE_71189_length_175_cov_2.956522_g71047_i0 PRJNA399711 71189 175 2.956522 5.1739135 Dictyostelium purpureum 5786 Evosea other_Eukaryota 78.2 3.76e-16   NR XP_003293531.1 5786 g71047 i0 68 35.2971428571429 50 16 85.7 0 174 25 137 186 XP_003293531.1 ribosomal protein L11 [Dictyostelium purpureum] diamond 6177 78.2 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
33071103 33071103 PRJNA399711_S_NODE_18829_length_281_cov_8.696721_g18687_i0 PRJNA399711 18829 281 8.696721 24.43778601 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 110 2.19e-26   NR PRP78186.1 1890364 g18687 i0 73 0.790035587188612 74 18 79 1 3 224 353 424 PRP78186.1 hypothetical protein PROFUN_11316 [Planoprotostelium fungivorum] diamond 222 110 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33088800 33088800 PRJNA399711_S_NODE_94550_length_158_cov_2.826446_g94408_i0 PRJNA399711 94550 158 2.826446 4.46578468 Acanthamoeba castellanii str. Neff 1257118 Discosea other_Eukaryota 58.2 4.22e-8   NR XP_004353733.1 1257118 g94408 i0 51.2 0.778481012658228 41 20 77.8 0 3 125 503 543 XP_004353733.1 Inosine5'-monophosphate dehydrogenase [Acanthamoeba castellanii str. Neff] diamond 123 58.2 1 Eukaryota Amoebozoa   Discosea   Longamoebia Acanthamoebidae Acanthamoeba Acanthamoeba castellanii
33129061 33129061 PRJNA399711_S_NODE_60751_length_185_cov_9.175676_g60609_i0 PRJNA399711 60751 185 9.175676 16.9750006 Evosea 2605435 Evosea other_Eukaryota 42 0.0102   NR XP_004361742.1 261658 g60609 i0 62.1 0.924324324324324 29 11 47 0 3 89 79 107 XP_004361742.1 DUF614 family protein [Cavenderia fasciculata] diamond 171 42 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Cavenderiaceae Cavenderia Cavenderia fasciculata
33139801 33139801 PRJNA399711_S_NODE_72319_length_174_cov_3.014599_g72177_i0 PRJNA399711 72319 174 3.014599 5.24540226 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 51.2 1.47e-5   NR PRP84188.1 1890364 g72177 i0 79.3 0.5 29 6 50 0 171 85 287 315 PRP84188.1 hypothetical protein PROFUN_08388 [Planoprotostelium fungivorum] diamond 87 51.2 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33156825 33156825 PRJNA399711_S_NODE_82160_length_166_cov_4.775194_g82018_i0 PRJNA399711 82160 166 4.775194 7.92682204 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 60.1 1e-8   NR PRP80250.1 1890364 g82018 i0 53.1 0.885542168674699 49 22 86.7 1 7 150 402 450 PRP80250.1 hypothetical protein PROFUN_12189 [Planoprotostelium fungivorum] diamond 147 60.1 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33173605 33173605 PRJNA399711_S_NODE_11816_length_328_cov_4.120275_g11674_i0 PRJNA399711 11816 328 4.120275 13.514502 Dictyostelium purpureum 5786 Evosea other_Eukaryota 62.8 3.31e-9   NR XP_003291532.1 5786 g11674 i0 65.9 0.375 41 14 37.5 0 307 185 166 206 XP_003291532.1 ribosomal protein L10E [Dictyostelium purpureum] diamond 123 62.8 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
33173850 33173850 PRJNA399711_S_NODE_45056_length_207_cov_1.358824_g44914_i0 PRJNA399711 45056 207 1.358824 2.81276568 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 75.9 4.92e-14   NR PRP80754.1 1890364 g44914 i0 67.2 0.840579710144927 58 18 82.6 1 204 34 451 508 PRP80754.1 hypothetical protein PROFUN_11494 [Planoprotostelium fungivorum] diamond 174 75.9 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
33173857 33173857 PRJNA399711_S_NODE_45832_length_205_cov_6.547619_g45690_i0 PRJNA399711 45832 205 6.547619 13.42261895 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 43.9 0.00495   NR KYR02436.1 361077 g45690 i0 41.1 1.65365853658537 56 31 82 2 199 32 106 159 KYR02436.1 hypothetical protein DLAC_01276 [Tieghemostelium lacteum] diamond 339 43.9 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;