RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA399133" and tax_phylum = "Candidatus Absconditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Absconditibacteriota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA399133 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28875447 28875447 PRJNA399133_P_NODE_7068_length_197_cov_2.154321_g6980_i0 PRJNA399133 7068 197 2.154321 4.24401237 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 49.7 6.34e-5   NR HMS90611.1 2927939 g6980 i0 41.5 0.989847715736041 65 34 97.5 2 196 5 105 166 HMS90611.1 DUF6492 family protein [Candidatus Absconditabacterales bacterium] diamond 195 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
30138219 30138219 PRJNA399133_P_NODE_9152_length_173_cov_2.572464_g9064_i0 PRJNA399133 9152 173 2.572464 4.45036272 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 90.1 2.21e-20   NR HMS90629.1 2927939 g9064 i0 75 0.971098265895954 56 14 97.1 0 2 169 104 159 HMS90629.1 prohibitin family protein [Candidatus Absconditabacterales bacterium] diamond 168 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
32793287 32793287 PRJNA399133_P_NODE_6220_length_211_cov_1.460227_g6132_i0 PRJNA399133 6220 211 1.460227 3.08107897 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 42 0.0442   NR HMS91428.1 2927939 g6132 i0 51.6 0.440758293838863 31 15 44.1 0 188 96 372 402 HMS91428.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 93 42 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;