RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA399133" and tax_kingdom = "Metazoa"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Metazoa · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA399133 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26870991 26870991 PRJNA399133_P_NODE_5001_length_229_cov_2.072165_g4913_i0 PRJNA399133 5001 229 2.072165 4.74525785 Chordata 7711 Chordata Chordata 51.2 3.25e-5   NR XP_007885991.2 7868 g4913 i0 100 197.449781659389 24 0 31.4 0 2 73 697 720 XP_007885991.2 liprin-beta-2 isoform X2 [Callorhinchus milii] diamond 45216 51.2 1 Eukaryota Opisthokonta Metazoa Chordata Chondrichthyes Chimaeriformes Callorhinchidae Callorhinchus Callorhinchus milii
29096587 29096587 PRJNA399133_P_NODE_9608_length_170_cov_1.185185_g9520_i0 PRJNA399133 9608 170 1.185185 2.0148145 Leptotrombidium deliense 299467 Arthropoda Arthropoda 69.7 1.31e-12   NR RWS23085.1 299467 g9520 i0 60.4 0.847058823529412 48 18 84.7 1 150 7 22 68 RWS23085.1 hypothetical protein B4U80_13961 [Leptotrombidium deliense] diamond 144 69.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Trombidiformes Trombiculidae Leptotrombidium Leptotrombidium deliense
31434168 31434168 PRJNA399133_P_NODE_8696_length_178_cov_1.398601_g8608_i0 PRJNA399133 8696 178 1.398601 2.48950978 Araneus ventricosus 182803 Arthropoda Arthropoda 51.2 1.62e-5   NR GBN61280.1 182803 g8608 i0 56.8 5.6123595505618 44 19 74.2 0 2 133 1145 1188 GBN61280.1 putative RNA-directed DNA polymerase from transposon X-element [Araneus ventricosus] diamond 999 51.2 1 Eukaryota Opisthokonta Metazoa Arthropoda Arachnida Araneae Araneidae Araneus Araneus ventricosus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;