RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

27 rows where analysis = "diamond", bioproject = "PRJNA399133" and tax_clade = "Bacteria candidate phyla"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_clade 1

  • Bacteria candidate phyla · 27 ✖

bioproject 1

  • PRJNA399133 · 27 ✖

analysis 1

  • diamond · 27 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26758768 26758768 PRJNA399133_P_NODE_4741_length_233_cov_1.792929_g4653_i0 PRJNA399133 4741 233 1.792929 4.17752457 Candidatus Babelota bacterium 2030827 Bacteria Bacteria 53.9 3.63e-6   NR MBM3887298.1 2030827 g4653 i0 100 1.28755364806867 25 0 32.2 0 233 159 56 80 MBM3887298.1 recombinase [Candidatus Dependentiae bacterium] diamond 300 53.9 1 Bacteria Bacteria candidate phyla             Candidatus Babelota bacterium
26854141 26854141 PRJNA399133_P_NODE_9321_length_172_cov_1.890511_g9233_i0 PRJNA399133 9321 172 1.890511 3.25167892 Candidatus Portnoybacteria bacterium 2053593 Bacteria Bacteria 41.6 0.0365   NR MBL7155341.1 2053593 g9233 i0 48.7 0.680232558139535 39 14 59.3 2 170 69 276 313 MBL7155341.1 DNA gyrase subunit A [Candidatus Portnoybacteria bacterium] diamond 117 41.6 1 Bacteria Bacteria candidate phyla   Candidatus Portnoyibacteriota         Candidatus Portnoybacteria bacterium
26997065 26997065 PRJNA399133_P_NODE_6062_length_214_cov_1.117318_g5974_i0 PRJNA399133 6062 214 1.117318 2.39106052 Bacteria 2 Bacteria Bacteria 82 1.33e-16   NR MCS7316827.1 2099670 g5974 i0 56.7 1.86448598130841 67 28 92.5 1 200 3 225 291 MCS7316827.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 399 82.4 0.995145631067961 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
27169987 27169987 PRJNA399133_P_NODE_9882_length_167_cov_2.250000_g9794_i0 PRJNA399133 9882 167 2.25 3.7575 Candidatus Delongbacteria bacterium 2044594 Bacteria Bacteria 41.2 0.0472   NR MDY0018281.1 2044594 g9794 i0 48 0.898203592814371 50 23 89.8 2 160 11 153 199 MDY0018281.1 glutamine synthetase [Candidatus Delongbacteria bacterium] diamond 150 41.2 1 Bacteria Bacteria candidate phyla   Candidatus Delongiibacteriota         Candidatus Delongbacteria bacterium
27707653 27707653 PRJNA399133_P_NODE_10244_length_164_cov_2.294574_g10156_i0 PRJNA399133 10244 164 2.294574 3.76310136 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 55.8 3.03e-7   NR NCU26359.1 2052152 g10156 i0 53.7 2.01219512195122 54 17 84.1 1 26 163 528 581 NCU26359.1 DUF4815 domain-containing protein [Candidatus Nomurabacteria bacterium] diamond 330 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
27833423 27833423 PRJNA399133_P_NODE_6524_length_206_cov_0.935673_g6436_i0 PRJNA399133 6524 206 0.935673 1.92748638 Minisyncoccota bacterium 2053589 Bacteria Bacteria 96.3 3.23e-21   NR HPI81636.1 2053589 g6436 i0 64.2 0.975728155339806 67 24 97.6 0 5 205 544 610 HPI81636.1 glycosyltransferase [Candidatus Paceibacterota bacterium] diamond 201 96.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
27864935 27864935 PRJNA399133_P_NODE_3465_length_270_cov_1.940426_g3377_i0 PRJNA399133 3465 270 1.940426 5.2391502 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 55.8 1.21e-6   NR NBP56886.1 2802965 g3377 i0 63.9 0.4 36 13 40 0 269 162 389 424 NBP56886.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 108 55.8 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
27959753 27959753 PRJNA399133_P_NODE_5865_length_218_cov_1.393443_g5777_i0 PRJNA399133 5865 218 1.393443 3.03770574 Patescibacteria group bacterium 2052139 Bacteria Bacteria 112 1.25e-28   NR MFA5753893.1 2052139 g5777 i0 66.7 0.990825688073395 72 24 99.1 0 2 217 31 102 MFA5753893.1 glycosyltransferase [Patescibacteria group bacterium] diamond 216 112 1 Bacteria Bacteria candidate phyla             Patescibacteria group bacterium
28039747 28039747 PRJNA399133_P_NODE_3345_length_275_cov_1.529167_g3257_i0 PRJNA399133 3345 275 1.529167 4.20520925 Bacillati 1783272 Bacteria Bacteria 50.4 1.02e-4   NR HTE49158.1 2053589 g3257 i0 45.7 1.48363636363636 70 34 73.1 2 208 8 32 100 HTE49158.1 peptidoglycan-binding domain-containing protein [Candidatus Paceibacterota bacterium] diamond 408 50.8 0.992125984251969 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
28307145 28307145 PRJNA399133_P_NODE_9186_length_173_cov_1.963768_g9098_i0 PRJNA399133 9186 173 1.963768 3.39731864 Candidatus Altimarinota bacterium 2044595 Bacteria Bacteria 54.7 8.72e-7   NR MFA6090403.1 2044595 g9098 i0 41.5 2.80924855491329 82 23 98.8 2 172 2 347 428 MFA6090403.1 transglycosylase SLT domain-containing protein [Candidatus Altimarinota bacterium] diamond 486 54.7 1 Bacteria Bacteria candidate phyla   Candidatus Altimarinota         Candidatus Altimarinota bacterium
28370221 28370221 PRJNA399133_P_NODE_3386_length_273_cov_2.449580_g3298_i0 PRJNA399133 3386 273 2.44958 6.6873534 Candidatus Moraniibacteriota bacterium 2045217 Bacteria Bacteria 86.7 1.62e-18   NR MDD3965322.1 2045217 g3298 i0 47.7 0.967032967032967 88 46 96.7 0 270 7 87 174 MDD3965322.1 hypothetical protein [Candidatus Moraniibacteriota bacterium] diamond 264 86.7 1 Bacteria Bacteria candidate phyla   Candidatus Moraniibacteriota         Candidatus Moraniibacteriota bacterium
28496693 28496693 PRJNA399133_P_NODE_11307_length_157_cov_1.967213_g11219_i0 PRJNA399133 11307 157 1.967213 3.08852441 Candidatus Roizmanbacteria bacterium CG_4_1 2282149 Bacteria Bacteria 52 6.34e-6   NR PIZ63241.1 1974825 g11219 i0 54.3 0.878980891719745 46 21 87.9 0 2 139 35 80 PIZ63241.1 MAG: hypothetical protein COY16_02600, partial [Candidatus Roizmanbacteria bacterium CG_4_10_14_0_2_um_filter_39_13] diamond 138 52 1 Bacteria Bacteria candidate phyla   Candidatus Roizmaniibacteriota         Candidatus Roizmanbacteria bacterium CG_4_10_14_0_2_um_filter_39_13
28496695 28496695 PRJNA399133_P_NODE_5847_length_218_cov_1.912568_g5759_i0 PRJNA399133 5847 218 1.912568 4.16939824 Candidatus Peribacteraceae bacterium 2735830 Bacteria Bacteria 44.7 0.00536   NR MCK5018232.1 2735830 g5759 i0 29.2 0.990825688073395 72 50 99.1 1 1 216 115 185 MCK5018232.1 hypothetical protein [Candidatus Peribacteraceae bacterium] diamond 216 44.7 1 Bacteria Bacteria candidate phyla   Candidatus Peregrinibacteriota Candidatus Peribacteria Candidatus Peribacterales     Candidatus Peribacteraceae bacterium
28875447 28875447 PRJNA399133_P_NODE_7068_length_197_cov_2.154321_g6980_i0 PRJNA399133 7068 197 2.154321 4.24401237 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 49.7 6.34e-5   NR HMS90611.1 2927939 g6980 i0 41.5 0.989847715736041 65 34 97.5 2 196 5 105 166 HMS90611.1 DUF6492 family protein [Candidatus Absconditabacterales bacterium] diamond 195 49.7 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
28906806 28906806 PRJNA399133_P_NODE_4088_length_250_cov_1.302326_g4000_i0 PRJNA399133 4088 250 1.302326 3.255815 Parcubacteria group bacterium ADurb.Bin216 1852939 Bacteria Bacteria 47.4 9.9e-4   NR OQB09838.1 1852939 g4000 i0 38.3 0.972 81 45 97.2 3 250 8 217 292 OQB09838.1 MAG: hypothetical protein BWY21_00628 [Parcubacteria group bacterium ADurb.Bin216] diamond 243 47.4 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium ADurb.Bin216
29159815 29159815 PRJNA399133_P_NODE_12329_length_151_cov_1.275862_g12241_i0 PRJNA399133 12329 151 1.275862 1.92655162 Parcubacteria group bacterium GW2 2026774 Bacteria Bacteria 49.3 1.44e-5   NR KKP41143.1 1618807 g12241 i0 51.2 0.854304635761589 43 20 85.4 1 5 133 48 89 KKP41143.1 MAG: hypothetical protein UR31_C0036G0001 [Parcubacteria group bacterium GW2011_GWA2_33_14] diamond 129 49.3 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium GW2011_GWA2_33_14
29222953 29222953 PRJNA399133_P_NODE_1509_length_409_cov_1.655080_g1424_i0 PRJNA399133 1509 409 1.65508 6.7692772 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 142 4.5e-36   NR HQJ73315.1 2099670 g1424 i0 57.8 0.990220048899755 135 55 98.3 2 402 1 78 211 HQJ73315.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 405 142 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
29460202 29460202 PRJNA399133_P_NODE_10710_length_161_cov_1.904762_g10622_i0 PRJNA399133 10710 161 1.904762 3.06666682 root 1 Root_unresolved Root_unresolved 43.5 0.00658   NR MFA5360625.1 2053589 g10622 i0 44.6 7.2111801242236 56 26 98.8 2 160 2 238 291 MFA5360625.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 1161 43.5 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
29664428 29664428 PRJNA399133_P_NODE_7450_length_192_cov_2.509554_g7362_i0 PRJNA399133 7450 192 2.509554 4.81834368 Parcubacteria group bacterium ADurb.Bin216 1852939 Bacteria Bacteria 46.6 8.72e-4   NR OQB09839.1 1852939 g7362 i0 42.4 1.03125 66 36 100 1 1 192 1344 1409 OQB09839.1 MAG: putative molybdenum carrier [Parcubacteria group bacterium ADurb.Bin216] diamond 198 46.6 1 Bacteria Bacteria candidate phyla             Parcubacteria group bacterium ADurb.Bin216
30138219 30138219 PRJNA399133_P_NODE_9152_length_173_cov_2.572464_g9064_i0 PRJNA399133 9152 173 2.572464 4.45036272 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 90.1 2.21e-20   NR HMS90629.1 2927939 g9064 i0 75 0.971098265895954 56 14 97.1 0 2 169 104 159 HMS90629.1 prohibitin family protein [Candidatus Absconditabacterales bacterium] diamond 168 90.1 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium
30454883 30454883 PRJNA399133_P_NODE_9133_length_174_cov_1.151079_g9045_i0 PRJNA399133 9133 174 1.151079 2.00287746 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 48.9 1.02e-4   NR MCS7317667.1 2099670 g9045 i0 47.4 1.94827586206897 57 29 96.6 1 7 174 388 444 MCS7317667.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 339 48.9 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
30643967 30643967 PRJNA399133_P_NODE_7193_length_195_cov_3.343750_g7105_i0 PRJNA399133 7193 195 3.34375 6.5203125 Minisyncoccota bacterium 2053589 Bacteria Bacteria 62.8 5.67e-10   NR HPI82506.1 2053589 g7105 i0 70.3 1.21538461538462 37 11 56.9 0 192 82 164 200 HPI82506.1 GIY-YIG nuclease family protein [Candidatus Paceibacterota bacterium] diamond 237 62.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31371203 31371203 PRJNA399133_P_NODE_5696_length_221_cov_4.075269_g5608_i0 PRJNA399133 5696 221 4.075269 9.00634449 Candidatus Dojkabacteria bacterium 2099670 Bacteria Bacteria 72.4 9.87e-13   NR HPR92026.1 2099670 g5608 i0 68.6 1.35746606334842 51 16 69.2 0 155 3 724 774 HPR92026.1 hypothetical protein [Candidatus Dojkabacteria bacterium] diamond 300 72.4 1 Bacteria Bacteria candidate phyla             Candidatus Dojkabacteria bacterium
31592573 31592573 PRJNA399133_P_NODE_3776_length_260_cov_1.337778_g3688_i0 PRJNA399133 3776 260 1.337778 3.4782228 candidate division WWE3 bacterium 2053526 Bacteria Bacteria 71.2 1.5e-12   NR MBT7350516.1 2053526 g3688 i0 52.7 0.853846153846154 74 33 84.2 2 260 42 36 108 MBT7350516.1 GIY-YIG nuclease family protein [candidate division WWE3 bacterium] diamond 222 71.2 1 Bacteria Bacteria candidate phyla   candidate division WWE3         candidate division WWE3 bacterium
31845319 31845319 PRJNA399133_P_NODE_10057_length_166_cov_1.221374_g9969_i0 PRJNA399133 10057 166 1.221374 2.02748084 Candidatus Elulimicrobium humile 2802965 Bacteria Bacteria 85.9 3.13e-20   NR NBP56968.1 2802965 g9969 i0 72.7 0.993975903614458 55 15 99.4 0 165 1 36 90 NBP56968.1 hypothetical protein [Candidatus Elulimicrobium humile] diamond 165 85.9 1 Bacteria Bacteria candidate phyla   Candidatus Elulimicrobiota Candidatus Elulimicrobia Candidatus Elulimicrobiales Candidatus Elulimicrobiaceae Candidatus Elulimicrobium Candidatus Elulimicrobium humile
32604619 32604619 PRJNA399133_P_NODE_6080_length_213_cov_2.539326_g5992_i0 PRJNA399133 6080 213 2.539326 5.40876438 Minisyncoccota bacterium 2053589 Bacteria Bacteria 65.9 1.74e-10   NR MDP7366801.1 2053589 g5992 i0 49.3 0.971830985915493 69 35 97.2 0 2 208 366 434 MDP7366801.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 207 65.9 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32793287 32793287 PRJNA399133_P_NODE_6220_length_211_cov_1.460227_g6132_i0 PRJNA399133 6220 211 1.460227 3.08107897 Candidatus Absconditabacterales bacterium 2927939 Bacteria Bacteria 42 0.0442   NR HMS91428.1 2927939 g6132 i0 51.6 0.440758293838863 31 15 44.1 0 188 96 372 402 HMS91428.1 hypothetical protein [Candidatus Absconditabacterales bacterium] diamond 93 42 1 Bacteria Bacteria candidate phyla   Candidatus Absconditibacteriota   Candidatus Absconditabacterales     Candidatus Absconditabacterales bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;