RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA397065" and tax_phylum = "Lenarviricota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA397065 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27391615 27391615 PRJNA397065_S_NODE_18363_length_160_cov_1.786260_g18113_i0 PRJNA397065 18363 160 1.78626 2.858016 Henan mito-like virus 24 2937099 Viruses Viruses 51.2 1.24e-5   NR UPW42100.1 2937099 g18113 i0 54.5 0.825 44 20 82.5 0 2 133 130 173 UPW42100.1 MAG: putative RNA dependent RNA polymerase [Henan mito-like virus 24] diamond 132 51.2 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae   Henan mito-like virus 24
27833390 27833390 PRJNA397065_S_NODE_19964_length_150_cov_1.545455_g19714_i0 PRJNA397065 19964 150 1.545455 2.3181825 Sunflower rust-associated mitovirus 1 2761498 Viruses Viruses 54.7 6.47e-7   NR QMW50423.1 2761498 g19714 i0 65 0.8 40 14 80 0 22 141 141 180 QMW50423.1 RNA-dependent RNA polymerase, partial [Sunflower rust-associated mitovirus 1] diamond 120 54.7 1 Viruses   Orthornavirae Lenarviricota Howeltoviricetes Cryppavirales Mitoviridae Mitovirus Sunflower rust-associated mitovirus 1

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;