RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA396510" and tax_phylum = "Pisuviricota"

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tax_superkingdom 1

tax_phylum 1

  • Pisuviricota · 4 ✖

tax_kingdom 1

bioproject 1

  • PRJNA396510 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23364004 23364004 PRJNA396510_P_NODE_1639_length_415_cov_3.109290_g1570_i0 PRJNA396510 1639 415 3.10929 12.9035535 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 154 1.7e-40   NR AVM87439.1 3063761 g1570 i0 56 0.968674698795181 134 56 94.7 1 395 3 467 600 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 402 154 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
27833388 27833388 PRJNA396510_P_NODE_6024_length_237_cov_2.914894_g5955_i0 PRJNA396510 6024 237 2.914894 6.90829878 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 69.3 1.56e-11   NR AVM87439.1 3063761 g5955 i0 43.8 1.0126582278481 80 40 98.7 2 234 1 1457 1533 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 240 69.3 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2
29475033 29475033 PRJNA396510_P_NODE_3130_length_316_cov_1.842697_g3061_i0 PRJNA396510 3130 316 1.842697 5.82292252 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 105 8.31e-24   NR YP_009104360.1 3063761 g3061 i0 55.7 0.920886075949367 97 40 89.2 3 3 284 771 867 YP_009104360.1 polyprotein [Crohivirus A] diamond 291 105 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales Picornaviridae Crohivirus Danio blood picornavirus/Zebrafish picornavirus 2
30297029 30297029 PRJNA396510_P_NODE_6812_length_225_cov_1.448864_g6743_i0 PRJNA396510 6812 225 1.448864 3.259944 Danio blood picornavirus/Zebrafish picornavirus 2 3063761 Viruses Viruses 80.5 1.49e-15   NR AVM87439.1 3063761 g6743 i0 52.8 0.96 72 34 96 0 217 2 928 999 AVM87439.1 polyprotein [Wuhan sharpbelly picornavirus 1] diamond 216 80.5 1 Viruses   Orthornavirae Pisuviricota Pisoniviricetes Picornavirales     Danio blood picornavirus/Zebrafish picornavirus 2

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;