contig_metadata
27 rows where analysis = "diamond", bioproject = "PRJNA396510" and tax_kingdom = "Bacillati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 411888 | 411888 | PRJNA396510_P_NODE_15361_length_163_cov_0.894737_g15292_i0 | PRJNA396510 | 15361 | 163 | 0.894737 | 1.45842131 | Streptococcus thermophilus | 1308 | Bacteria | Bacteria | 112 | 5.08e-27 | NR | TKW62483.1 | 1308 | g15292 | i0 | 100 | 1.98773006134969 | 54 | 0 | 99.4 | 0 | 1 | 162 | 550 | 603 | TKW62483.1 MAG: hypothetical protein DI612_08705, partial [Streptococcus thermophilus] | diamond | 324 | 112 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Streptococcaceae | Streptococcus | Streptococcus thermophilus | ||
| 26726804 | 26726804 | PRJNA396510_P_NODE_14301_length_165_cov_0.879310_g14232_i0 | PRJNA396510 | 14301 | 165 | 0.87931 | 1.4508615 | Levyella massiliensis | 938289 | Bacteria | Bacteria | 112 | 2.9e-28 | NR | WP_019190309.1 | 938289 | g14232 | i0 | 96.3 | 0.981818181818182 | 54 | 2 | 98.2 | 0 | 3 | 164 | 116 | 169 | WP_019190309.1 MaoC/PaaZ C-terminal domain-containing protein [Levyella massiliensis] | diamond | 162 | 112 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Levyella | Levyella massiliensis | |||
| 26980402 | 26980402 | PRJNA396510_P_NODE_7722_length_214_cov_0.927273_g7653_i0 | PRJNA396510 | 7722 | 214 | 0.927273 | 1.98436422 | Microbacterium algeriense | 2615184 | Bacteria | Bacteria | 136 | 3.7e-39 | NR | WP_270366854.1 | 2615184 | g7653 | i0 | 98.6 | 0.995327102803738 | 71 | 1 | 99.5 | 0 | 1 | 213 | 87 | 157 | WP_270366854.1 hypothetical protein [Microbacterium algeriense] | diamond | 213 | 136 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium algeriense | ||
| 27043759 | 27043759 | PRJNA396510_P_NODE_13842_length_166_cov_0.871795_g13773_i0 | PRJNA396510 | 13842 | 166 | 0.871795 | 1.4471797 | Microbacterium suwonense | 683047 | Bacteria | Bacteria | 94.7 | 3.62e-21 | NR | WP_286299404.1 | 683047 | g13773 | i0 | 83.6 | 1.98795180722892 | 55 | 9 | 99.4 | 0 | 1 | 165 | 183 | 237 | WP_286299404.1 ATP-binding protein [Microbacterium suwonense] | diamond | 330 | 94.7 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium suwonense | ||
| 27138141 | 27138141 | PRJNA396510_P_NODE_13942_length_166_cov_0.871795_g13873_i0 | PRJNA396510 | 13942 | 166 | 0.871795 | 1.4471797 | Microbacterium algeriense | 2615184 | Bacteria | Bacteria | 111 | 7.260000000000001e-27 | NR | WP_319031288.1 | 2615184 | g13873 | i0 | 98.2 | 0.993975903614458 | 55 | 1 | 99.4 | 0 | 165 | 1 | 1510 | 1564 | WP_319031288.1 DUF7507 domain-containing protein [Microbacterium algeriense] | diamond | 165 | 111 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium algeriense | ||
| 27233436 | 27233436 | PRJNA396510_P_NODE_15243_length_163_cov_0.894737_g15174_i0 | PRJNA396510 | 15243 | 163 | 0.894737 | 1.45842131 | Microbacterium sp. TS-1 | 1344956 | Bacteria | Bacteria | 47 | 4.09e-4 | NR | WP_023953597.1 | 1344956 | g15174 | i0 | 49 | 0.901840490797546 | 49 | 19 | 88.3 | 2 | 7 | 150 | 269 | 312 | WP_023953597.1 glycoside hydrolase family 2 protein [Microbacterium sp. TS-1] | diamond | 147 | 47 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. TS-1 | ||
| 27896516 | 27896516 | PRJNA396510_P_NODE_5765_length_242_cov_1.191710_g5696_i0 | PRJNA396510 | 5765 | 242 | 1.19171 | 2.8839382 | Microbacterium sp. KKR3/1 | 2904241 | Bacteria | Bacteria | 148 | 2.8299999999999993e-42 | NR | WP_232761915.1 | 2904241 | g5696 | i0 | 81.4 | 1.06611570247934 | 86 | 10 | 99.2 | 1 | 2 | 241 | 87 | 172 | WP_232761915.1 bifunctional DNA primase/polymerase [Microbacterium sp. KKR3/1] | diamond | 258 | 148 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. KKR3/1 | ||
| 28243762 | 28243762 | PRJNA396510_P_NODE_11306_length_180_cov_1.053435_g11237_i0 | PRJNA396510 | 11306 | 180 | 1.053435 | 1.896183 | Anaerolineae bacterium | 2052143 | Bacteria | Bacteria | 40.8 | 0.0245 | NR | NIV31772.1 | 2052143 | g11237 | i0 | 43.8 | 0.8 | 48 | 25 | 80 | 1 | 10 | 153 | 37 | 82 | NIV31772.1 hypothetical protein [Anaerolineae bacterium] | diamond | 144 | 40.8 | 1 | Bacteria | Bacillati | Chloroflexota | Anaerolineae | Anaerolineae bacterium | |||||
| 28559830 | 28559830 | PRJNA396510_P_NODE_16327_length_161_cov_0.910714_g16258_i0 | PRJNA396510 | 16327 | 161 | 0.910714 | 1.46624954 | Actinomycetota bacterium | 2900548 | Bacteria | Bacteria | 54.3 | 3.08e-7 | NR | MSW51030.1 | 2900548 | g16258 | i0 | 46.2 | 0.968944099378882 | 52 | 28 | 96.9 | 0 | 4 | 159 | 71 | 122 | MSW51030.1 GNAT family N-acetyltransferase [Actinomycetota bacterium] | diamond | 156 | 54.3 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetota bacterium | ||||||
| 28797221 | 28797221 | PRJNA396510_P_NODE_15507_length_163_cov_0.894737_g15438_i0 | PRJNA396510 | 15507 | 163 | 0.894737 | 1.45842131 | Bacteria | 2 | Bacteria | Bacteria | 106 | 7.45e-28 | NR | MBN9993869.1 | 1639 | g15438 | i0 | 100 | 3.97546012269939 | 54 | 0 | 99.4 | 0 | 163 | 2 | 28 | 81 | MBN9993869.1 hypothetical protein [Listeria monocytogenes] | diamond | 648 | 106 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Listeriaceae | Listeria | Listeria monocytogenes | ||
| 28828872 | 28828872 | PRJNA396510_P_NODE_10188_length_189_cov_0.928571_g10119_i0 | PRJNA396510 | 10188 | 189 | 0.928571 | 1.75499919 | Microbacterium | 33882 | Bacteria | Bacteria | 112 | 3.44e-30 | NR | WP_147805346.1 | 322686 | g10119 | i0 | 98.4 | 2.95238095238095 | 62 | 1 | 98.4 | 0 | 187 | 2 | 26 | 87 | WP_147805346.1 hypothetical protein [Microbacterium sp. R1] | diamond | 558 | 112 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium sp. R1 | ||
| 29822428 | 29822428 | PRJNA396510_P_NODE_13611_length_166_cov_0.871795_g13542_i0 | PRJNA396510 | 13611 | 166 | 0.871795 | 1.4471797 | Microlunatus sp. | 39595 | Bacteria | Bacteria | 41.6 | 0.0328 | NR | HEU5484225.1 | 39595 | g13542 | i0 | 34.8 | 0.831325301204819 | 46 | 30 | 83.1 | 0 | 164 | 27 | 346 | 391 | HEU5484225.1 cytochrome P450 [Microlunatus sp.] | diamond | 138 | 41.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Propionibacteriales | Propionibacteriaceae | Microlunatus | Microlunatus sp. | ||
| 29949062 | 29949062 | PRJNA396510_P_NODE_13351_length_167_cov_0.864407_g13282_i0 | PRJNA396510 | 13351 | 167 | 0.864407 | 1.44355969 | Chloroflexia bacterium | 2448782 | Bacteria | Bacteria | 107 | 2.65e-25 | NR | MBA3275463.1 | 2448782 | g13282 | i0 | 94.5 | 6.89820359281437 | 55 | 3 | 98.8 | 0 | 166 | 2 | 265 | 319 | MBA3275463.1 succinate dehydrogenase flavoprotein subunit [Chloroflexia bacterium] | diamond | 1152 | 107 | 1 | Bacteria | Bacillati | Chloroflexota | Chloroflexia | Chloroflexia bacterium | |||||
| 29949063 | 29949063 | PRJNA396510_P_NODE_16031_length_162_cov_0.902655_g15962_i0 | PRJNA396510 | 16031 | 162 | 0.902655 | 1.4623011 | Microbacterium maritypicum | 33918 | Bacteria | Bacteria | 104 | 1.74e-24 | NR | WP_141385741.1 | 33918 | g15962 | i0 | 87 | 2.98148148148148 | 54 | 7 | 100 | 0 | 1 | 162 | 396 | 449 | WP_141385741.1 zinc-ribbon domain-containing protein [Microbacterium maritypicum] | diamond | 483 | 104 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium maritypicum | ||
| 30043705 | 30043705 | PRJNA396510_P_NODE_12631_length_170_cov_1.264463_g12562_i0 | PRJNA396510 | 12631 | 170 | 1.264463 | 2.1495871 | Microbacterium maritypicum | 33918 | Bacteria | Bacteria | 105 | 6.09e-26 | NR | WP_141385734.1 | 33918 | g12562 | i0 | 94.6 | 0.988235294117647 | 56 | 3 | 98.8 | 0 | 1 | 168 | 83 | 138 | WP_141385734.1 FAD-dependent thymidylate synthase [Microbacterium maritypicum] | diamond | 168 | 105 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium maritypicum | ||
| 30360211 | 30360211 | PRJNA396510_P_NODE_14852_length_164_cov_0.886957_g14783_i0 | PRJNA396510 | 14852 | 164 | 0.886957 | 1.45460948 | Microbacterium oleivorans | 273677 | Bacteria | Bacteria | 73.6 | 4.66e-14 | NR | WP_251577210.1 | 273677 | g14783 | i0 | 71.7 | 1.82926829268293 | 46 | 13 | 84.1 | 0 | 2 | 139 | 176 | 221 | WP_251577210.1 peptidase E [Microbacterium oleivorans] | diamond | 300 | 73.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium oleivorans | ||
| 30376876 | 30376876 | PRJNA396510_P_NODE_11812_length_176_cov_1.204724_g11743_i0 | PRJNA396510 | 11812 | 176 | 1.204724 | 2.12031424 | Microbacterium | 33882 | Bacteria | Bacteria | 62 | 7.38e-10 | NR | WP_204938144.1 | 67574 | g11743 | i0 | 73.2 | 4.17613636363636 | 41 | 9 | 69.9 | 1 | 47 | 169 | 147 | 185 | WP_204938144.1 acyl-CoA desaturase [Microbacterium keratanolyticum] | diamond | 735 | 62.4 | 0.993589743589744 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium keratanolyticum | ||
| 30486162 | 30486162 | PRJNA396510_P_NODE_9953_length_191_cov_0.838028_g9884_i0 | PRJNA396510 | 9953 | 191 | 0.838028 | 1.60063348 | Paenibacillus gyeongsangnamensis | 3388067 | Bacteria | Bacteria | 41.6 | 0.0479 | NR | WP_269884168.1 | 3388067 | g9884 | i0 | 31 | 0.910994764397906 | 58 | 38 | 91.1 | 2 | 184 | 11 | 65 | 120 | WP_269884168.1 uracil/xanthine transporter [Paenibacillus gyeongsangnamensis] | diamond | 174 | 41.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus gyeongsangnamensis | ||
| 30517721 | 30517721 | PRJNA396510_P_NODE_13233_length_167_cov_0.864407_g13164_i0 | PRJNA396510 | 13233 | 167 | 0.864407 | 1.44355969 | Microbacterium maritypicum | 33918 | Bacteria | Bacteria | 85.5 | 8.25e-18 | NR | WP_141385742.1 | 33918 | g13164 | i0 | 88.9 | 0.808383233532934 | 45 | 5 | 80.8 | 0 | 166 | 32 | 362 | 406 | WP_141385742.1 helix-turn-helix domain-containing protein [Microbacterium maritypicum] | diamond | 135 | 85.5 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium maritypicum | ||
| 31560938 | 31560938 | PRJNA396510_P_NODE_13176_length_167_cov_0.864407_g13107_i0 | PRJNA396510 | 13176 | 167 | 0.864407 | 1.44355969 | Microbacterium oxydans | 82380 | Bacteria | Bacteria | 71.6 | 2.86e-13 | NR | WP_371861860.1 | 82380 | g13107 | i0 | 72 | 0.898203592814371 | 50 | 13 | 88 | 1 | 147 | 1 | 1 | 50 | WP_371861860.1 ATP-binding protein [Microbacterium oxydans] | diamond | 150 | 71.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium oxydans | ||
| 31577575 | 31577575 | PRJNA396510_P_NODE_5156_length_254_cov_1.087805_g5087_i0 | PRJNA396510 | 5156 | 254 | 1.087805 | 2.7630247 | Paenibacillus | 44249 | Bacteria | Bacteria | 42.7 | 0.0402 | NR | WP_238655226.1 | 1089681 | g5087 | i0 | 36.2 | 1.37007874015748 | 58 | 37 | 68.5 | 0 | 33 | 206 | 143 | 200 | WP_238655226.1 alpha/beta hydrolase [Paenibacillus piscarius] | diamond | 348 | 42.7 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Paenibacillaceae | Paenibacillus | Paenibacillus piscarius | ||
| 32066788 | 32066788 | PRJNA396510_P_NODE_10038_length_190_cov_1.085106_g9969_i0 | PRJNA396510 | 10038 | 190 | 1.085106 | 2.0617014 | Microbacterium terricola | 344163 | Bacteria | Bacteria | 72.4 | 1.24e-13 | NR | WP_263797845.1 | 344163 | g9969 | i0 | 74.5 | 0.742105263157895 | 47 | 12 | 74.2 | 0 | 189 | 49 | 95 | 141 | WP_263797845.1 DUF5343 domain-containing protein [Microbacterium terricola] | diamond | 141 | 72.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium terricola | ||
| 32130356 | 32130356 | PRJNA396510_P_NODE_15258_length_163_cov_0.894737_g15189_i0 | PRJNA396510 | 15258 | 163 | 0.894737 | 1.45842131 | Mediannikoviicoccus vaginalis | 2899727 | Bacteria | Bacteria | 92.4 | 3.82e-20 | NR | WP_237036350.1 | 2899727 | g15189 | i0 | 92.5 | 0.975460122699387 | 53 | 4 | 97.5 | 0 | 3 | 161 | 801 | 853 | WP_237036350.1 DNA mismatch repair protein MutS [Mediannikoviicoccus vaginalis] | diamond | 159 | 92.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Mediannikoviicoccus | Mediannikoviicoccus vaginalis | ||
| 32351877 | 32351877 | PRJNA396510_P_NODE_13979_length_166_cov_0.863248_g13910_i0 | PRJNA396510 | 13979 | 166 | 0.863248 | 1.43299168 | Oscillospiraceae bacterium | 2485925 | Bacteria | Bacteria | 47.4 | 3.1e-4 | NR | MBE6951160.1 | 2485925 | g13910 | i0 | 45 | 0.72289156626506 | 40 | 22 | 72.3 | 0 | 40 | 159 | 49 | 88 | MBE6951160.1 hypothetical protein [Oscillospiraceae bacterium] | diamond | 120 | 47.4 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Oscillospiraceae bacterium | |||
| 32446809 | 32446809 | PRJNA396510_P_NODE_12719_length_169_cov_1.700000_g12650_i0 | PRJNA396510 | 12719 | 169 | 1.7 | 2.873 | Agrococcus jenensis | 46353 | Bacteria | Bacteria | 73.6 | 7.75e-14 | NR | WP_123695993.1 | 46353 | g12650 | i0 | 60.7 | 1.98816568047337 | 56 | 22 | 99.4 | 0 | 168 | 1 | 89 | 144 | WP_123695993.1 hypothetical protein [Agrococcus jenensis] | diamond | 336 | 73.6 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Agrococcus | Agrococcus jenensis | ||
| 32573373 | 32573373 | PRJNA396510_P_NODE_16479_length_161_cov_0.910714_g16410_i0 | PRJNA396510 | 16479 | 161 | 0.910714 | 1.46624954 | Microbacterium algeriense | 2615184 | Bacteria | Bacteria | 99.8 | 1.49e-23 | NR | WP_151458817.1 | 2615184 | g16410 | i0 | 98.1 | 0.987577639751553 | 53 | 1 | 98.8 | 0 | 3 | 161 | 73 | 125 | WP_151458817.1 hypothetical protein [Microbacterium algeriense] | diamond | 159 | 99.8 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Micrococcales | Microbacteriaceae | Microbacterium | Microbacterium algeriense | ||
| 32762034 | 32762034 | PRJNA396510_P_NODE_10980_length_182_cov_1.533835_g10911_i0 | PRJNA396510 | 10980 | 182 | 1.533835 | 2.7915797 | Kitasatospora saccharophila | 407973 | Bacteria | Bacteria | 42.4 | 0.0193 | NR | WP_380276580.1 | 407973 | g10911 | i0 | 42.6 | 0.89010989010989 | 54 | 25 | 79.1 | 3 | 181 | 38 | 40 | 93 | WP_380276580.1 haloacid dehalogenase-like hydrolase [Kitasatospora saccharophila] | diamond | 162 | 42.4 | 1 | Bacteria | Bacillati | Actinomycetota | Actinomycetes | Kitasatosporales | Streptomycetaceae | Kitasatospora | Kitasatospora saccharophila |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;