RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA395690" and tax_phylum = "Candidatus Saccharimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Saccharimonadota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA395690 · 3 ✖

analysis 1

  • diamond · 3 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29380598 29380598 PRJNA395690_P_NODE_4409_length_377_cov_1.902439_g4260_i0 PRJNA395690 4409 377 1.902439 7.17219503 Candidatus Saccharimonadales bacterium 2973664 Bacteria Bacteria 191 2.59e-57   NR HSW91324.1 2973664 g4260 i0 74.3 0.89920424403183 113 26 89.9 1 38 376 4 113 HSW91324.1 hypothetical protein [Candidatus Saccharimonadales bacterium] diamond 339 191 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota Candidatus Saccharimonadia Candidatus Saccharimonadales     Candidatus Saccharimonadales bacterium
30770612 30770612 PRJNA395690_P_NODE_28754_length_167_cov_0.864407_g28602_i0 PRJNA395690 28754 167 0.864407 1.44355969 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 65.9 9.22e-11   NR MBI2797730.1 2026720 g28602 i0 50.9 0.988023952095808 55 27 98.8 0 166 2 35 89 MBI2797730.1 ABC-F family ATP-binding cassette domain-containing protein [Candidatus Saccharibacteria bacterium] diamond 165 65.9 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium
31908672 31908672 PRJNA395690_P_NODE_34837_length_162_cov_0.902655_g34685_i0 PRJNA395690 34837 162 0.902655 1.4623011 Candidatus Saccharimonadota bacterium 2026720 Bacteria Bacteria 57.4 8.05e-8   NR MCA9334040.1 2026720 g34685 i0 50.9 0.981481481481482 53 26 98.1 0 3 161 165 217 MCA9334040.1 endonuclease/exonuclease/phosphatase family protein [Candidatus Saccharibacteria bacterium] diamond 159 57.4 1 Bacteria Bacteria candidate phyla   Candidatus Saccharimonadota         Candidatus Saccharimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;