RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA395690" and tax_clade = "Metamonada"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Metamonada · 4 ✖

bioproject 1

  • PRJNA395690 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20205244 20205244 PRJNA395690_P_NODE_34496_length_162_cov_0.902655_g34344_i0 PRJNA395690 34496 162 0.902655 1.4623011 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 89.4 7.29e-20   NR GKT24450.1 2918883 g34344 i0 78.8 10.7777777777778 52 11 96.3 0 5 160 152 203 GKT24450.1 40S ribosomal protein S2 [Aduncisulcus paluster] diamond 1746 89.4 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27138127 27138127 PRJNA395690_P_NODE_35242_length_161_cov_2.250000_g35090_i0 PRJNA395690 35242 161 2.25 3.6225 Aduncisulcus paluster 2918883 Fornicata other_Eukaryota 42.4 0.0148   NR GKT30733.1 2918883 g35090 i0 55.9 0.633540372670807 34 15 63.4 0 133 32 174 207 GKT30733.1 hypothetical protein ADUPG1_005616, partial [Aduncisulcus paluster] diamond 102 42.4 1 Eukaryota Metamonada   Fornicata       Aduncisulcus Aduncisulcus paluster
27503055 27503055 PRJNA395690_P_NODE_19243_length_188_cov_1.834532_g19091_i0 PRJNA395690 19243 188 1.834532 3.44892016 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 61.2 1.54e-9   NR XP_068360038.1 1144522 g19091 i0 49.2 8.56914893617021 61 31 97.3 0 187 5 117 177 XP_068360038.1 40S ribosomal protein S9-1 [Tritrichomonas foetus] diamond 1611 61.6 0.993506493506494 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
32463459 32463459 PRJNA395690_P_NODE_10699_length_249_cov_1.275000_g10547_i0 PRJNA395690 10699 249 1.275 3.17475 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 100 8.46e-25   NR KAG9390573.1 201153 g10547 i0 73.9 4.97590361445783 69 17 83.1 1 42 248 59 126 KAG9390573.1 Ribosomal protein S11 [Carpediemonas membranifera] diamond 1239 100 1 Eukaryota Metamonada   Fornicata       Carpediemonas Carpediemonas membranifera

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;