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contig_metadata

16 rows where analysis = "diamond", bioproject = "PRJNA395690" and tax_clade = "Amoebozoa"

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tax_phylum 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA395690 · 16 ✖

analysis 1

  • diamond · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4906935 4906935 PRJNA395690_P_NODE_14364_length_215_cov_0.963855_g14212_i0 PRJNA395690 14364 215 0.963855 2.07228825 Eukaryota 2759 unresolved_Eukaryota other_Eukaryota 119 4.6399999999999994e-30   NR XP_003293941.1 5786 g14212 i0 77.1 6.05581395348837 70 16 97.7 0 214 5 309 378 XP_003293941.1 S-adenosylmethionine synthetase [Dictyostelium purpureum] diamond 1302 120 0.991666666666667 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium purpureum
15106753 15106753 PRJNA395690_P_NODE_31652_length_164_cov_1.895652_g31500_i0 PRJNA395690 31652 164 1.895652 3.10886928 Arcella hemisphaerica 497998 Tubulinea other_Eukaryota 92.4 1.3e-21   NR AFX73089.1 497998 g31500 i0 74.5 8.61585365853658 51 13 93.3 0 162 10 46 96 AFX73089.1 elongation factor 2 alpha, partial [Arcella hemisphaerica] diamond 1413 92.4 1 Eukaryota Amoebozoa   Tubulinea Elardia Arcellinida Arcellidae Arcella Arcella hemisphaerica
16381337 16381337 PRJNA395690_P_NODE_13233_length_224_cov_1.165714_g13081_i0 PRJNA395690 13233 224 1.165714 2.61119936 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 102 1.11e-26   NR ATE46696.1 1890364 g13081 i0 85.9 0.857142857142857 64 9 85.7 0 2 193 10 73 ATE46696.1 ATPase subunit 9 [Planoprotostelium fungivorum] diamond 192 102 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
22088397 22088397 PRJNA395690_P_NODE_9878_length_259_cov_0.971429_g9726_i0 PRJNA395690 9878 259 0.971429 2.51600111 Dictyosteliales 2058949 Evosea other_Eukaryota 103 7.22e-27   NR XP_628995.1 352472 g9726 i0 64.5 1.76061776061776 76 27 88 0 244 17 1 76 XP_628995.1 40S ribosomal protein S21 [Dictyostelium discoideum AX4] diamond 456 103 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Dictyosteliaceae Dictyostelium Dictyostelium discoideum
24638073 24638073 PRJNA395690_P_NODE_29800_length_166_cov_0.871795_g29648_i0 PRJNA395690 29800 166 0.871795 1.4471797 Didymium iridis 5793 Evosea other_Eukaryota 107 2.17e-25   NR ACZ96454.1 5793 g29648 i0 94.5 0.993975903614458 55 3 99.4 0 1 165 323 377 ACZ96454.1 ATP synthase subunit 1 [Didymium iridis] diamond 165 107 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
26822332 26822332 PRJNA395690_P_NODE_14861_length_211_cov_1.259259_g14709_i0 PRJNA395690 14861 211 1.259259 2.65703649 Entamoeba invadens IP1 370355 Evosea other_Eukaryota 44.7 0.00537   NR XP_004255854.1 370355 g14709 i0 43.5 1.27962085308057 46 26 65.4 0 61 198 1352 1397 XP_004255854.1 protein serine/threonine kinase, putative [Entamoeba invadens IP1] diamond 270 44.7 1 Eukaryota Amoebozoa   Evosea   Mastigamoebida Entamoebidae Entamoeba Entamoeba invadens
27864896 27864896 PRJNA395690_P_NODE_34905_length_162_cov_0.902655_g34753_i0 PRJNA395690 34905 162 0.902655 1.4623011 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 44.3 0.0037   NR KAH3731542.1 1580589 g34753 i0 44.4 1 54 29 100 1 162 1 802 854 KAH3731542.1 DEAD/DEAH box helicase, partial [Pelomyxa schiedti] diamond 162 44.3 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
28545069 28545069 PRJNA395690_P_NODE_35047_length_162_cov_0.902655_g34895_i0 PRJNA395690 35047 162 0.902655 1.4623011 Evosea 2605435 Evosea other_Eukaryota 57.4 7.22e-8   NR KYR02323.1 361077 g34895 i0 61.5 2.88888888888889 52 15 96.3 1 160 5 244 290 KYR02323.1 actin bundling protein [Tieghemostelium lacteum] diamond 468 57.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum
29790859 29790859 PRJNA395690_P_NODE_32671_length_164_cov_0.886957_g32519_i0 PRJNA395690 32671 164 0.886957 1.45460948 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 47.4 2.99e-4   NR KAH3760845.1 1580589 g32519 i0 40.7 0.98780487804878 54 32 98.8 0 2 163 136 189 KAH3760845.1 glycosyl hydrolase family 2 [Pelomyxa schiedti] diamond 162 47.4 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
30738756 30738756 PRJNA395690_P_NODE_10814_length_248_cov_0.773869_g10662_i0 PRJNA395690 10814 248 0.773869 1.91919512 Acytostelium subglobosum LB1 1410327 Evosea other_Eukaryota 45.4 0.0042   NR XP_012751558.1 1410327 g10662 i0 35.5 1.63306451612903 76 42 83.5 1 38 244 3 78 XP_012751558.1 hypothetical protein SAMD00019534_087470 [Acytostelium subglobosum LB1] diamond 405 45.4 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Acytosteliales Acytosteliaceae Acytostelium Acytostelium subglobosum
31497623 31497623 PRJNA395690_P_NODE_27736_length_168_cov_1.386555_g27584_i0 PRJNA395690 27736 168 1.386555 2.3294124 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 85.5 1.19e-17   NR PRP86551.1 1890364 g27584 i0 71.4 1 56 14 100 1 1 168 231 284 PRP86551.1 HEAT repeat-containing protein [Planoprotostelium fungivorum] diamond 168 85.5 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
31750367 31750367 PRJNA395690_P_NODE_4857_length_361_cov_1.461538_g4708_i0 PRJNA395690 4857 361 1.461538 5.27615218 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 91.7 2.29e-19   NR KAH3762540.1 1580589 g4708 i0 55.3 2.5096952908587302 76 30 63.2 1 360 133 232 303 KAH3762540.1 cathepsin L2 [Pelomyxa schiedti] diamond 906 91.7 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti
32193508 32193508 PRJNA395690_P_NODE_33378_length_163_cov_0.894737_g33226_i0 PRJNA395690 33378 163 0.894737 1.45842131 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 86.7 4.09e-18   NR PRP83929.1 1890364 g33226 i0 78.8 0.957055214723926 52 11 95.7 0 161 6 584 635 PRP83929.1 hypothetical protein PROFUN_08866 [Planoprotostelium fungivorum] diamond 156 86.7 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32573344 32573344 PRJNA395690_P_NODE_16319_length_201_cov_1.210526_g16167_i0 PRJNA395690 16319 201 1.210526 2.43315726 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 111 1.65e-29   NR PRP77723.1 1890364 g16167 i0 100 12.5373134328358 56 0 83.6 0 1 168 95 150 PRP77723.1 40S ribosomal protein S14 [Planoprotostelium fungivorum] diamond 2520 111 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32635828 32635828 PRJNA395690_P_NODE_22940_length_179_cov_2.961538_g22788_i0 PRJNA395690 22940 179 2.961538 5.30115302 Planoprotostelium fungivorum 1890364 Evosea other_Eukaryota 72.8 4.02e-13   NR PRP84007.1 1890364 g22788 i0 58.3 0.804469273743017 48 20 80.4 0 3 146 1079 1126 PRP84007.1 callose synthase 7-like [Planoprotostelium fungivorum] diamond 144 72.8 1 Eukaryota Amoebozoa   Evosea Variosea Cavosteliida Cavosteliaceae Planoprotostelium Planoprotostelium fungivorum
32887792 32887792 PRJNA395690_P_NODE_31180_length_165_cov_0.879310_g31028_i0 PRJNA395690 31180 165 0.87931 1.4508615 Tieghemostelium lacteum 361077 Evosea other_Eukaryota 66.6 4.95e-11   NR KYQ89091.1 361077 g31028 i0 50.9 1 55 27 100 0 165 1 368 422 KYQ89091.1 hypothetical protein DLAC_10322 [Tieghemostelium lacteum] diamond 165 66.6 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Dictyosteliales Raperosteliaceae Tieghemostelium Tieghemostelium lacteum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;