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contig_metadata

8 rows where analysis = "diamond", bioproject = "PRJNA393181" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 8 ✖

bioproject 1

  • PRJNA393181 · 8 ✖

analysis 1

  • diamond · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13164004 13164004 PRJNA393181_S_NODE_1911_length_708_cov_3.052161_g1838_i0 PRJNA393181 1911 708 3.052161 21.60929988 Nanobdellati 1783276 Archaea Archaea 239 5.24e-72   NR MBL7051962.1 2026764 g1838 i0 52.6 5.03813559322034 234 106 99.2 1 7 708 68 296 MBL7051962.1 M48 family metalloprotease [Nanoarchaeota archaeon] diamond 3567 239 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon
26600180 26600180 PRJNA393181_S_NODE_30381_length_203_cov_1.909639_g30275_i0 PRJNA393181 30381 203 1.909639 3.87656717 Candidatus Bathyarchaeia archaeon 3045160 Archaea Archaea 112 1.1000000000000002e-28   NR HYB69673.1 3045160 g30275 i0 68.7 1.98029556650246 67 21 99 0 203 3 118 184 HYB69673.1 methyltransferase domain-containing protein [Candidatus Bathyarchaeia archaeon] diamond 402 112 1 Archaea   Thermoproteati Candidatus Bathyarchaeota Candidatus Bathyarchaeia       Candidatus Bathyarchaeia archaeon
27644188 27644188 PRJNA393181_S_NODE_13544_length_327_cov_5.024138_g13438_i0 PRJNA393181 13544 327 5.024138 16.42893126 Natronomonas aquatica 2841590 Archaea Archaea 44.3 0.0153   NR WP_256030377.1 2841590 g13438 i0 36.7 0.55045871559633 60 36 55 1 73 252 46 103 WP_256030377.1 30S ribosomal protein S13 [Natronomonas aquatica] diamond 180 44.3 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Natronomonas Natronomonas aquatica
28433399 28433399 PRJNA393181_S_NODE_7946_length_423_cov_2.955959_g7840_i0 PRJNA393181 7946 423 2.955959 12.50370657 Methanothrix sp. 90426 Archaea Archaea 53.5 2.39e-5   NR MCX6670088.1 90426 g7840 i0 64.3 0.297872340425532 42 13 28.4 1 192 311 1 42 MCX6670088.1 tetratricopeptide repeat protein [Methanothrix sp.] diamond 126 53.5 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
29159717 29159717 PRJNA393181_S_NODE_18229_length_278_cov_2.531120_g18123_i0 PRJNA393181 18229 278 2.53112 7.0365136 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 62.4 6.86e-9   NR MAH45939.1 2026773 g18123 i0 52.8 0.571942446043165 53 25 57.2 0 118 276 9 61 MAH45939.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 159 62.4 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
29822337 29822337 PRJNA393181_S_NODE_12751_length_337_cov_6.056667_g12645_i0 PRJNA393181 12751 337 6.056667 20.41096779 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 52.8 3.19e-5   NR MCK5606176.1 2026773 g12645 i0 41.7 0.534124629080119 60 34 53.4 1 19 198 48 106 MCK5606176.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 180 52.8 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon
30770566 30770566 PRJNA393181_S_NODE_34254_length_187_cov_3.600000_g34148_i0 PRJNA393181 34254 187 3.6 6.732 Halorhabdus utahensis 146826 Archaea Archaea 42.4 0.0243   NR WP_049941156.1 146826 g34148 i0 52.5 0.641711229946524 40 19 64.2 0 67 186 20 59 WP_049941156.1 glycosyltransferase [Halorhabdus utahensis] diamond 120 42.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloarculaceae Halorhabdus Halorhabdus utahensis
32257021 32257021 PRJNA393181_S_NODE_13858_length_324_cov_2.097561_g13752_i0 PRJNA393181 13858 324 2.097561 6.79609764 Candidatus Pacearchaeota archaeon 2026773 Archaea Archaea 84.7 1.72e-16   NR MAH45939.1 2026773 g13752 i0 46.3 1 108 57 99.1 1 322 2 51 158 MAH45939.1 hypothetical protein [Candidatus Pacearchaeota archaeon] diamond 324 84.7 1 Archaea Candidatus Pacearchaeota Nanobdellati           Candidatus Pacearchaeota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;