RNAquarium Metadata Server
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contig_metadata

3 rows where analysis = "diamond", bioproject = "PRJNA393181" and tax_phylum = "Arthropoda"

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tax_superkingdom 1

tax_phylum 1

  • Arthropoda · 3 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA393181 · 3 ✖

analysis 1

  • diamond · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20812271 20812271 PRJNA393181_S_NODE_35277_length_184_cov_1.850340_g35171_i0 PRJNA393181 35277 184 1.85034 3.4046256 root 1 Root_unresolved Root_unresolved 57 1.59e-7   NR VVC97936.1 189913 g35171 i0 69 11.0217391304348 42 12 68.5 1 126 1 92 132 VVC97936.1 unnamed protein product [Leptidea sinapis] diamond 2028 57 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Lepidoptera Pieridae Leptidea Leptidea sinapis
30896957 30896957 PRJNA393181_S_NODE_18574_length_275_cov_2.457983_g18468_i0 PRJNA393181 18574 275 2.457983 6.75945325 Polyplax serrata 468196 Arthropoda Arthropoda 64.7 4.56e-10   NR KAK6619586.1 468196 g18468 i0 75 0.698181818181818 32 8 34.9 0 3 98 183 214 KAK6619586.1 hypothetical protein RUM43_012343 [Polyplax serrata] diamond 192 64.7 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Psocodea Polyplacidae Polyplax Polyplax serrata
31592470 31592470 PRJNA393181_S_NODE_34216_length_188_cov_1.291391_g34110_i0 PRJNA393181 34216 188 1.291391 2.42781508 Clunio marinus 568069 Arthropoda Arthropoda 116 1.04e-29   NR CRL02559.1 568069 g34110 i0 85.5 0.98936170212766 62 9 98.9 0 186 1 251 312 CRL02559.1 CLUMA_CG015843, isoform A [Clunio marinus] diamond 186 116 1 Eukaryota Opisthokonta Metazoa Arthropoda Insecta Diptera Chironomidae Clunio Clunio marinus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;