contig_metadata
4 rows where analysis = "diamond", bioproject = "PRJNA393181" and tax_clade = "Embryophyta"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24637085 | 24637085 | PRJNA393181_S_NODE_37920_length_175_cov_2.384058_g37814_i0 | PRJNA393181 | 37920 | 175 | 2.384058 | 4.1721015 | Macleaya cordata | 56857 | Plants | Plants | 65.9 | 2.66e-11 | NR | OVA17630.1 | 56857 | g37814 | i0 | 59.6 | 3.75428571428571 | 57 | 21 | 94.3 | 1 | 165 | 1 | 113 | 169 | OVA17630.1 Small GTPase superfamily [Macleaya cordata] | diamond | 657 | 65.9 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Ranunculales | Papaveraceae | Macleaya | Macleaya cordata | |
| 29460173 | 29460173 | PRJNA393181_S_NODE_31930_length_197_cov_0.968750_g31824_i0 | PRJNA393181 | 31930 | 197 | 0.96875 | 1.9084375 | Magnoliopsida | 3398 | Plants | Plants | 63.9 | 1.22e-10 | NR | XP_028115218.1 | 4442 | g31824 | i0 | 64.4 | 7.29441624365482 | 59 | 20 | 88.3 | 1 | 196 | 23 | 87 | 145 | XP_028115218.1 transmembrane protein 208-like [Camellia sinensis] | diamond | 1437 | 63.9 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Ericales | Theaceae | Camellia | Camellia sinensis | |
| 31339194 | 31339194 | PRJNA393181_S_NODE_43996_length_159_cov_0.942623_g43890_i0 | PRJNA393181 | 43996 | 159 | 0.942623 | 1.49877057 | Ceratodon purpureus | 3225 | Plants | Plants | 89.4 | 2.77e-21 | NR | KAG0576969.1 | 3225 | g43890 | i0 | 90.6 | 1 | 53 | 5 | 100 | 0 | 159 | 1 | 46 | 98 | KAG0576969.1 hypothetical protein KC19_5G122100 [Ceratodon purpureus] | diamond | 159 | 89.4 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Bryopsida | Pseudoditrichales | Ditrichaceae | Ceratodon | Ceratodon purpureus | |
| 32761960 | 32761960 | PRJNA393181_S_NODE_34500_length_187_cov_1.280000_g34394_i0 | PRJNA393181 | 34500 | 187 | 1.28 | 2.3936 | Trapa incisa | 236973 | Plants | Plants | 42.4 | 0.0237 | NR | KAK4750609.1 | 236973 | g34394 | i0 | 39.2 | 1.66844919786096 | 51 | 30 | 80.2 | 1 | 152 | 3 | 257 | 307 | KAK4750609.1 hypothetical protein SAY87_004091 [Trapa incisa] | diamond | 312 | 42.4 | 1 | Eukaryota | Embryophyta | Viridiplantae | Streptophyta | Magnoliopsida | Myrtales | Lythraceae | Trapa | Trapa incisa |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;