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contig_metadata

28 rows where analysis = "diamond", bioproject = "PRJNA390533" and tax_clade = "Embryophyta"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Embryophyta · 28 ✖

bioproject 1

  • PRJNA390533 · 28 ✖

analysis 1

  • diamond · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13163590 13163590 PRJNA390533_P_NODE_4311_length_918_cov_2.260523_g3735_i0 PRJNA390533 4311 918 2.260523 20.751601139999998 Amborella trichopoda 13333 Plants Plants 177 6.2e-52   NR XP_006844639.2 13333 g3735 i0 63.9 0.434640522875817 133 45 43.5 1 54 452 1 130 XP_006844639.2 HVA22-like protein e [Amborella trichopoda] diamond 399 177 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Amborellales Amborellaceae Amborella Amborella trichopoda
19535318 19535318 PRJNA390533_P_NODE_13316_length_522_cov_16.244306_g12353_i0 PRJNA390533 13316 522 16.244306 84.79527732 Lolium perenne 4522 Plants Plants 204 9.910000000000001e-64   NR XP_051203898.1 4522 g12353 i0 85 0.689655172413793 120 18 69 0 497 138 73 192 XP_051203898.1 uncharacterized protein LOC127317374 [Lolium perenne] diamond 360 204 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium perenne
20811456 20811456 PRJNA390533_P_NODE_40277_length_179_cov_2.307143_g39250_i0 PRJNA390533 40277 179 2.307143 4.12978597 root 1 Root_unresolved Root_unresolved 94.7 3.9800000000000006e-21   NR XP_057948064.1 397392 g39250 i0 89.3 44.6312849162011 56 6 93.9 0 170 3 344 399 XP_057948064.1 phosphoglycerate kinase, cytosolic [Malania oleifera] diamond 7989 95.5 0.991623036649215 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Santalales Ximeniaceae Malania Malania oleifera
26663451 26663451 PRJNA390533_P_NODE_33541_length_218_cov_9.525140_g32514_i0 PRJNA390533 33541 218 9.52514 20.7648052 Cucumis melo var. makuwa 1194695 Plants Plants 52.8 1.68e-6   NR KAA0058983.1 1194695 g32514 i0 64.1 0.536697247706422 39 14 53.7 0 87 203 40 78 KAA0058983.1 putative endo-1,3(4)-beta-glucanase 2 [Cucumis melo var. makuwa] diamond 117 52.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Cucurbitales Cucurbitaceae Cucumis Cucumis melo
26790555 26790555 PRJNA390533_P_NODE_43741_length_167_cov_0.953125_g42714_i0 PRJNA390533 43741 167 0.953125 1.59171875 Triticum aestivum 4565 Plants Plants 95.1 4.72e-21   NR BDI54545.1 4565 g42714 i0 73.1 0.934131736526946 52 14 93.4 0 156 1 711 762 BDI54545.1 nucleolar and coiled-body phosphoprotein 1-like, partial [Triticum aestivum] diamond 156 95.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Triticum Triticum aestivum
27028836 27028836 PRJNA390533_P_NODE_11522_length_573_cov_1.981273_g10605_i0 PRJNA390533 11522 573 1.981273 11.35269429 Magnoliopsida 3398 Plants Plants 129 4.989999999999999e-31   NR XP_022866758.1 158386 g10605 i0 50.5 2.80104712041885 107 53 56 0 359 39 9 115 XP_022866758.1 uncharacterized protein LOC111386530 [Olea europaea var. sylvestris] diamond 1605 130 0.992307692307692 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Olea Olea europaea
27976453 27976453 PRJNA390533_P_NODE_10725_length_596_cov_4.868941_g9827_i0 PRJNA390533 10725 596 4.868941 29.01888836 Magnoliopsida 3398 Plants Plants 46.6 0.00236   NR CAA0394719.1 3702 g9827 i0 43.1 2.0989932885906 72 31 31.2 3 458 273 2 73 CAA0394719.1 unnamed protein product [Arabidopsis thaliana] diamond 1251 46.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Brassicales Brassicaceae Arabidopsis Arabidopsis thaliana
28370079 28370079 PRJNA390533_P_NODE_3746_length_970_cov_19.149302_g3215_i0 PRJNA390533 3746 970 19.149302 185.7482294 Ceratodon purpureus 3225 Plants Plants 371 1.23e-126   NR KAG0567052.1 3225 g3215 i0 80.6 0.702061855670103 227 44 70.2 0 816 136 7 233 KAG0567052.1 hypothetical protein KC19_7G106700 [Ceratodon purpureus] diamond 681 371 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
28545051 28545051 PRJNA390533_P_NODE_39527_length_183_cov_1.090278_g38500_i0 PRJNA390533 39527 183 1.090278 1.99520874 root 1 Root_unresolved Root_unresolved 76.6 1.75e-15   NR GMD90523.1 4120 g38500 i0 82.9 3.90163934426229 41 7 67.2 0 60 182 24 64 GMD90523.1 thioredoxin reductase NTRC [Ipomoea batatas] diamond 714 76.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Convolvulaceae Ipomoea Ipomoea batatas
28576371 28576371 PRJNA390533_P_NODE_11487_length_573_cov_27.683521_g10572_i0 PRJNA390533 11487 573 27.683521 158.62657533 Magnoliopsida 3398 Plants Plants 79.3 1.83e-14   NR KAF4388071.1 3483 g10572 i0 88.6 2.2303664921466 44 5 23 0 546 415 44 87 KAF4388071.1 hypothetical protein F8388_014754 [Cannabis sativa] diamond 1278 79.3 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Rosales Cannabaceae Cannabis Cannabis sativa
29208072 29208072 PRJNA390533_P_NODE_18969_length_402_cov_1.570248_g17949_i0 PRJNA390533 18969 402 1.570248 6.31239696 Magnoliopsida 3398 Plants Plants 75.1 4.01e-14   NR GKU88917.1 152421 g17949 i0 71.7 1.79850746268657 60 17 44.8 0 394 215 56 115 GKU88917.1 hypothetical protein SLEP1_g3126 [Rubroshorea leprosula] diamond 723 75.5 0.994701986754967 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Malvales Dipterocarpaceae Rubroshorea Rubroshorea leprosula
29253974 29253974 PRJNA390533_P_NODE_1289_length_1417_cov_5.701742_g1063_i0 PRJNA390533 1289 1417 5.701742 80.79368414 Ceratodon purpureus 3225 Plants Plants 471 9.759999999999999e-161   NR KAG0559621.1 3225 g1063 i0 56.9 0.884968242766408 418 153 83.8 8 1417 230 6 418 KAG0559621.1 hypothetical protein KC19_10G119000 [Ceratodon purpureus] diamond 1254 471 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
29411990 29411990 PRJNA390533_P_NODE_17909_length_420_cov_3.627297_g16892_i0 PRJNA390533 17909 420 3.627297 15.2346474 Asparagus officinalis 4686 Plants Plants 84.7 1.94e-17   NR ONK75651.1 4686 g16892 i0 80 0.357142857142857 50 10 35.7 0 5 154 122 171 ONK75651.1 uncharacterized protein A4U43_C03F19120 [Asparagus officinalis] diamond 150 84.7 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Asparagaceae Asparagus Asparagus officinalis
29632717 29632717 PRJNA390533_P_NODE_7650_length_711_cov_22.108631_g6894_i0 PRJNA390533 7650 711 22.108631 157.19236641 Adiantum nelumboides 2759587 Plants Plants 106 5.8599999999999996e-24   NR MCO5578226.1 2759587 g6894 i0 50.7 0.565400843881857 134 50 49.8 5 96 449 3 136 MCO5578226.1 hypothetical protein [Adiantum nelumboides] diamond 402 106 1 Eukaryota Embryophyta Viridiplantae Streptophyta Polypodiopsida Polypodiales Pteridaceae Adiantum Adiantum nelumboides
29727539 29727539 PRJNA390533_P_NODE_38810_length_186_cov_1.612245_g37783_i0 PRJNA390533 38810 186 1.612245 2.9987757 Apostasia shenzhenica 1088818 Plants Plants 40.8 0.0136   NR PKA67061.1 1088818 g37783 i0 61.5 0.419354838709677 26 10 41.9 0 77 154 17 42 PKA67061.1 hypothetical protein AXF42_Ash004552 [Apostasia shenzhenica] diamond 78 40.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Asparagales Orchidaceae Apostasia Apostasia shenzhenica
30012215 30012215 PRJNA390533_P_NODE_26091_length_306_cov_3.352060_g25064_i0 PRJNA390533 26091 306 3.35206 10.2573036 Lolium perenne 4522 Plants Plants 53.1 7.86e-6   NR XP_051208054.1 4522 g25064 i0 30.4 2.19607843137255 112 61 93.1 1 22 306 39 150 XP_051208054.1 uncharacterized protein LOC127323903 isoform X2 [Lolium perenne] diamond 672 53.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium perenne
30012218 30012218 PRJNA390533_P_NODE_29851_length_254_cov_1.693023_g28824_i0 PRJNA390533 29851 254 1.693023 4.30027842 Picea sitchensis 3332 Plants Plants 78.6 9.67e-15   NR ABK25480.1 3332 g28824 i0 77.3 0.519685039370079 44 10 52 0 1 132 417 460 ABK25480.1 unknown [Picea sitchensis] diamond 132 78.6 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Pinales Pinaceae Picea Picea sitchensis
30075126 30075126 PRJNA390533_P_NODE_13512_length_517_cov_2.897490_g12541_i0 PRJNA390533 13512 517 2.89749 14.9800233 Ceratodon purpureus 3225 Plants Plants 63.5 5.77e-9   NR KAG0615955.1 3225 g12541 i0 39.2 0.562862669245648 97 49 51.6 2 498 232 85 179 KAG0615955.1 hypothetical protein M758_5G079300 [Ceratodon purpureus] diamond 291 63.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Bryopsida Pseudoditrichales Ditrichaceae Ceratodon Ceratodon purpureus
30612243 30612243 PRJNA390533_P_NODE_12073_length_557_cov_5.185328_g11137_i0 PRJNA390533 12073 557 5.185328 28.88227696 Diospyros lotus 55363 Plants Plants 95.1 5.02e-22   NR XP_052203006.1 55363 g11137 i0 60.5 2.87612208258528 81 30 43.6 1 506 264 1 79 XP_052203006.1 uncharacterized protein LOC127808484 [Diospyros lotus] diamond 1602 95.1 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Ericales Ebenaceae Diospyros Diospyros lotus
30770511 30770511 PRJNA390533_P_NODE_20934_length_370_cov_3.308157_g19910_i0 PRJNA390533 20934 370 3.308157 12.2401809 Heracleum sosnowskyi 360622 Plants Plants 120 1.09e-30   NR KAK1373039.1 360622 g19910 i0 91.2 0.551351351351351 68 6 55.1 0 349 146 187 254 KAK1373039.1 late embryogenesis abundant protein D-34-like [Heracleum sosnowskyi] diamond 204 120 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Apiales Apiaceae Heracleum Heracleum sosnowskyi
31307500 31307500 PRJNA390533_P_NODE_19255_length_397_cov_4.583799_g18233_i0 PRJNA390533 19255 397 4.583799 18.19768203 Lolium rigidum 89674 Plants Plants 89 2.24e-20   NR XP_047061562.1 89674 g18233 i0 58.4 0.581863979848867 77 29 55.9 2 347 126 1 77 XP_047061562.1 uncharacterized protein LOC124668476 [Lolium rigidum] diamond 231 89 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Poales Poaceae Lolium Lolium rigidum
31529128 31529128 PRJNA390533_P_NODE_13716_length_511_cov_9.792373_g12739_i0 PRJNA390533 13716 511 9.792373 50.03902603 Quercus rubra 3512 Plants Plants 134 9.08e-38   NR KAK4589130.1 3512 g12739 i0 91.8 0.428571428571429 73 5 42.9 1 156 374 1 72 KAK4589130.1 hypothetical protein RGQ29_019925 [Quercus rubra] diamond 219 134 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fagales Fagaceae Quercus Quercus rubra
31655318 31655318 PRJNA390533_P_NODE_14037_length_503_cov_7.711207_g13056_i0 PRJNA390533 14037 503 7.711207 38.78737121 Forsythia ovata 205694 Plants Plants 79 5.02e-15   NR KAL2548042.1 205694 g13056 i0 60 0.775347912524851 70 23 41.7 2 22 231 2 66 KAL2548042.1 Rapid ALkalinization Factor [Forsythia ovata] diamond 390 79 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Lamiales Oleaceae Forsythia Forsythia ovata
32098380 32098380 PRJNA390533_P_NODE_43858_length_166_cov_1.913386_g42831_i0 PRJNA390533 43858 166 1.913386 3.17622076 Cryptomeria japonica 3369 Plants Plants 85.9 8.32e-18   NR GLJ55894.1 3369 g42831 i0 81.8 1.98795180722892 55 10 99.4 0 2 166 491 545 GLJ55894.1 hypothetical protein SUGI_1200030 [Cryptomeria japonica] diamond 330 85.9 1 Eukaryota Embryophyta Viridiplantae Streptophyta Pinopsida Cupressales Cupressaceae Cryptomeria Cryptomeria japonica
32242139 32242139 PRJNA390533_P_NODE_3478_length_1002_cov_10.861890_g2973_i0 PRJNA390533 3478 1002 10.86189 108.8361378 Magnoliopsida 3398 Plants Plants 47.4 0.0181   NR XP_068466390.1 3885 g2973 i0 35.8 0.470059880239521 53 34 15.9 0 708 866 84 136 XP_068466390.1 RING-H2 finger protein ATL40-like [Phaseolus vulgaris] diamond 471 47.4 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Fabales Fabaceae Phaseolus Phaseolus vulgaris
32621192 32621192 PRJNA390533_P_NODE_39100_length_185_cov_1.102740_g38073_i0 PRJNA390533 39100 185 1.10274 2.040069 root 1 Root_unresolved Root_unresolved 60.5 9.5e-9   NR KMZ60691.1 29655 g38073 i0 55.3 5.4972972972973 47 20 74.6 1 171 34 481 527 KMZ60691.1 transducin family protein / WD-40 repeat family protein [Zostera marina] diamond 1017 60.5 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Alismatales Zosteraceae Zostera Zostera marina
32635737 32635737 PRJNA390533_P_NODE_21140_length_367_cov_5.015244_g20116_i0 PRJNA390533 21140 367 5.015244 18.40594548 Solanum pinnatisectum 50273 Plants Plants 77.8 2.51e-15   NR KAK4732708.1 50273 g20116 i0 40.4 1.4550408719346 89 47 69.5 2 109 363 8 94 KAK4732708.1 hypothetical protein R3W88_025696 [Solanum pinnatisectum] diamond 534 77.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Solanales Solanaceae Solanum Solanum pinnatisectum
32635744 32635744 PRJNA390533_P_NODE_34700_length_210_cov_2.292398_g33673_i0 PRJNA390533 34700 210 2.292398 4.8140358 Acorus calamus 4465 Plants Plants 72.8 3.26e-14   NR KAK1306485.1 4465 g33673 i0 65.3 2.91428571428571 49 17 70 0 210 64 96 144 KAK1306485.1 40S ribosomal protein S19-1 [Acorus calamus] diamond 612 72.8 1 Eukaryota Embryophyta Viridiplantae Streptophyta Magnoliopsida Acorales Acoraceae Acorus Acorus calamus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;