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contig_metadata

284 rows where analysis = "diamond", bioproject = "PRJNA385396" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 284 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385396 · 284 ✖

analysis 1

  • diamond · 284 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
406754 406754 PRJNA385396_P_NODE_11661_length_267_cov_1.082474_g11569_i0 PRJNA385396 11661 267 1.082474 2.89020558 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 162 1.4899999999999999e-47   NR WP_056239338.1 1736382 g11569 i0 85.2 0.98876404494382 88 13 98.9 0 2 265 67 154 WP_056239338.1 glycosyltransferase family 2 protein [Methylobacterium sp. Leaf456] diamond 264 162 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
406896 406896 PRJNA385396_P_NODE_16721_length_247_cov_0.885057_g16629_i0 PRJNA385396 16721 247 0.885057 2.18609079 Phyllobacterium sp. 1871046 Bacteria Bacteria 166 6.29e-48   NR WP_346307727.1 1871046 g16629 i0 98.8 0.995951417004049 82 1 99.6 0 246 1 9 90 WP_346307727.1 iron ABC transporter permease, partial [Phyllobacterium sp.] diamond 246 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium sp.
406963 406963 PRJNA385396_P_NODE_19581_length_243_cov_0.905882_g19489_i0 PRJNA385396 19581 243 0.905882 2.20129326 Methyloversatilis discipulorum 1119528 Bacteria Bacteria 127 3.64e-33   NR WP_019917043.1 1119528 g19489 i0 93.5 0.765432098765432 62 4 76.5 0 242 57 256 317 WP_019917043.1 glycolate oxidase subunit GlcE [Methyloversatilis discipulorum] diamond 186 127 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Nitrosomonadales Sterolibacteriaceae Methyloversatilis Methyloversatilis discipulorum
406990 406990 PRJNA385396_P_NODE_20961_length_241_cov_1.511905_g20869_i0 PRJNA385396 20961 241 1.511905 3.64369105 Novosphingobium 165696 Bacteria Bacteria 123 6.57e-32   NR HXD02073.1 1874826 g20869 i0 94.8 3.60995850622407 58 3 72.2 0 174 1 1 58 HXD02073.1 glycosyltransferase [Novosphingobium sp.] diamond 870 123 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Novosphingobium Novosphingobium sp.
407229 407229 PRJNA385396_P_NODE_8481_length_304_cov_1.000000_g8389_i0 PRJNA385396 8481 304 1 3.04 Bradyrhizobium sp. 188 2782656 Bacteria Bacteria 176 1.31e-53   NR WP_247563656.1 2782656 g8389 i0 86.3 2.00328947368421 102 13 99.7 1 304 2 84 185 WP_247563656.1 J domain-containing protein [Bradyrhizobium sp. 188] diamond 609 176 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 188
1076537 1076537 PRJNA385396_P_NODE_19001_length_244_cov_0.900585_g18909_i0 PRJNA385396 19001 244 0.900585 2.1974274 Bradyrhizobium oropedii 1571201 Bacteria Bacteria 147 6.26e-39   NR WP_229183267.1 1571201 g18909 i0 92.6 1.99180327868852 81 6 99.6 0 1 243 1495 1575 WP_229183267.1 filamentous haemagglutinin family protein [Bradyrhizobium oropedii] diamond 486 147 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium oropedii
1681660 1681660 PRJNA385396_P_NODE_15302_length_249_cov_0.875000_g15210_i0 PRJNA385396 15302 249 0.875 2.17875 Bradyrhizobium sp. 376 Bacteria Bacteria 159 4.08e-44   NR WP_298362392.1 376 g15210 i0 100 0.987951807228916 82 0 98.8 0 248 3 184 265 WP_298362392.1 flavin-containing monooxygenase [Bradyrhizobium sp.] diamond 246 159 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
1681782 1681782 PRJNA385396_P_NODE_20722_length_242_cov_0.911243_g20630_i0 PRJNA385396 20722 242 0.911243 2.20520806 Bradyrhizobium denitrificans 2734912 Bacteria Bacteria 180 1.6799999999999997e-55   NR WP_061979434.1 2734912 g20630 i0 100 0.991735537190083 80 0 99.2 0 3 242 76 155 WP_061979434.1 SOS response-associated peptidase [Bradyrhizobium denitrificans] diamond 240 180 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium denitrificans
2351914 2351914 PRJNA385396_P_NODE_17822_length_245_cov_1.854651_g17730_i0 PRJNA385396 17822 245 1.854651 4.54389495 Methylorubrum rhodinum 29428 Bacteria Bacteria 126 1.64e-31   NR WP_183566081.1 29428 g17730 i0 85.9 1.91020408163265 78 11 95.5 0 244 11 1227 1304 WP_183566081.1 beta strand repeat-containing protein [Methylorubrum rhodinum] diamond 468 126 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
2351927 2351927 PRJNA385396_P_NODE_8122_length_309_cov_0.978814_g8030_i0 PRJNA385396 8122 309 0.978814 3.02453526 Methylobacteriaceae 119045 Bacteria Bacteria 115 3.3800000000000003e-29   NR WP_183574061.1 29428 g8030 i0 93.2 1.14563106796116 59 4 57.3 0 132 308 1 59 WP_183574061.1 trans-aconitate 2-methyltransferase [Methylorubrum rhodinum] diamond 354 115 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
2957614 2957614 PRJNA385396_P_NODE_19163_length_244_cov_0.900585_g19071_i0 PRJNA385396 19163 244 0.900585 2.1974274 Bradyrhizobium sp. Ai1a-2 196490 Bacteria Bacteria 117 2.03e-28   NR WP_027580552.1 196490 g19071 i0 79.7 0.971311475409836 79 16 97.1 0 6 242 2229 2307 WP_027580552.1 filamentous haemagglutinin family protein [Bradyrhizobium sp. Ai1a-2] diamond 237 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Ai1a-2
2957619 2957619 PRJNA385396_P_NODE_19363_length_243_cov_2.717647_g19271_i0 PRJNA385396 19363 243 2.717647 6.60388221 Bradyrhizobium tropiciagri 312253 Bacteria Bacteria 156 2.03e-45   NR WP_211985103.1 312253 g19271 i0 82.7 1 81 14 100 0 1 243 35 115 WP_211985103.1 class I SAM-dependent methyltransferase [Bradyrhizobium tropiciagri] diamond 243 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium tropiciagri
4233885 4233885 PRJNA385396_P_NODE_13184_length_252_cov_1.290503_g13092_i0 PRJNA385396 13184 252 1.290503 3.25206756 Methylorubrum rhodinum 29428 Bacteria Bacteria 90.5 5.95e-19   NR WP_246390537.1 29428 g13092 i0 87.7 0.678571428571429 57 7 67.9 0 82 252 3 59 WP_246390537.1 putative bifunctional diguanylate cyclase/phosphodiesterase [Methylorubrum rhodinum] diamond 171 90.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
5510715 5510715 PRJNA385396_P_NODE_21485_length_241_cov_0.916667_g21393_i0 PRJNA385396 21485 241 0.916667 2.20916747 Qipengyuania sp. YIM B 2004515 Bacteria Bacteria 164 1.46e-47   NR WP_199504263.1 2778646 g21393 i0 100 0.995850622406639 80 0 99.6 0 2 241 52 131 WP_199504263.1 glycosyltransferase family 4 protein [Qipengyuania sp. YIM B01966] diamond 240 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Qipengyuania Qipengyuania sp. YIM B01966
5510751 5510751 PRJNA385396_P_NODE_2685_length_462_cov_1.069409_g2593_i0 PRJNA385396 2685 462 1.069409 4.94066958 Bradyrhizobium sp. NP1 3049772 Bacteria Bacteria 116 3.14e-28   NR WP_289658358.1 3049772 g2593 i0 73.4 0.512987012987013 79 21 51.3 0 152 388 1 79 WP_289658358.1 ATP-binding protein [Bradyrhizobium sp. NP1] diamond 237 116 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. NP1
5510753 5510753 PRJNA385396_P_NODE_2725_length_459_cov_1.396373_g2633_i0 PRJNA385396 2725 459 1.396373 6.40935207 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 122 3.719999999999999e-31   NR WP_298271244.1 199684 g2633 i0 49.3 0.915032679738562 140 55 86.9 4 458 60 102 232 WP_298271244.1 hypothetical protein [uncultured Bradyrhizobium sp.] diamond 420 122 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
5510784 5510784 PRJNA385396_P_NODE_3445_length_417_cov_1.258721_g3353_i0 PRJNA385396 3445 417 1.258721 5.24886657 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 174 1.7299999999999994e-48   NR WP_056244224.1 1736382 g3353 i0 96.9 0.690647482014389 96 2 69.1 1 416 129 500 594 WP_056244224.1 cell division protein FtsZ [Methylobacterium sp. Leaf456] diamond 288 174 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
5510806 5510806 PRJNA385396_P_NODE_4085_length_391_cov_0.883648_g3993_i0 PRJNA385396 4085 391 0.883648 3.45506368 Antarcticimicrobium luteum 2547397 Bacteria Bacteria 166 5.949999999999999e-46   NR WP_342635568.1 2547397 g3993 i0 69.7 1.01278772378517 132 34 98.2 2 386 3 61 190 WP_342635568.1 AMP-binding protein [Antarcticimicrobium luteum] diamond 396 166 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Antarcticimicrobium Antarcticimicrobium luteum
5510979 5510979 PRJNA385396_P_NODE_9125_length_295_cov_1.184685_g9033_i0 PRJNA385396 9125 295 1.184685 3.49482075 Methylorubrum rhodinum 29428 Bacteria Bacteria 107 3.5400000000000005e-27   NR WP_183571812.1 29428 g9033 i0 77.3 0.76271186440678 75 14 76.3 1 226 2 2 73 WP_183571812.1 BON domain-containing protein [Methylorubrum rhodinum] diamond 225 107 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
6179530 6179530 PRJNA385396_P_NODE_16285_length_248_cov_0.880000_g16193_i0 PRJNA385396 16285 248 0.88 2.1824 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 145 4.58e-41   NR WP_056239826.1 1736382 g16193 i0 90.2 0.991935483870968 82 8 99.2 0 2 247 141 222 WP_056239826.1 type II secretion system protein GspK [Methylobacterium sp. Leaf456] diamond 246 145 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
6179550 6179550 PRJNA385396_P_NODE_6565_length_332_cov_1.189189_g6473_i0 PRJNA385396 6565 332 1.189189 3.94810748 Methylobacterium 407 Bacteria Bacteria 63.5 5.42e-9   NR WP_331287259.1 119045 g6473 i0 42 1.50903614457831 88 49 79.5 1 68 331 1120 1205 WP_331287259.1 MULTISPECIES: CHASE domain-containing protein [Methylobacteriaceae] diamond 501 63.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae    
6179553 6179553 PRJNA385396_P_NODE_9925_length_285_cov_1.452830_g9833_i0 PRJNA385396 9925 285 1.45283 4.1405655 Bradyrhizobium sp. INPA 376 Bacteria Bacteria 193 3.1199999999999996e-56   NR WP_353704751.1 418598 g9833 i0 96.8 0.989473684210526 94 3 98.9 0 283 2 473 566 WP_353704751.1 tannase/feruloyl esterase family alpha/beta hydrolase [Bradyrhizobium sp. INPA03-11B] diamond 282 193 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. INPA03-11B
6784526 6784526 PRJNA385396_P_NODE_15386_length_249_cov_0.875000_g15294_i0 PRJNA385396 15386 249 0.875 2.17875 Methylorubrum rhodinum 29428 Bacteria Bacteria 103 1.1699999999999997e-23   NR WP_312885993.1 29428 g15294 i0 69.4 1.02409638554217 85 17 91.6 1 12 239 1387 1471 WP_312885993.1 calcium-binding protein [Methylorubrum rhodinum] diamond 255 103 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
6784553 6784553 PRJNA385396_P_NODE_16466_length_247_cov_0.885057_g16374_i0 PRJNA385396 16466 247 0.885057 2.18609079 Methylobacterium 407 Bacteria Bacteria 149 1.1599999999999999e-41   NR WP_244540679.1 407 g16374 i0 89.3 3.03643724696356 84 7 99.6 1 2 247 169 252 WP_244540679.1 MULTISPECIES: aldo/keto reductase [Methylobacterium] diamond 750 149 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
6784789 6784789 PRJNA385396_P_NODE_5246_length_358_cov_1.080702_g5154_i0 PRJNA385396 5246 358 1.080702 3.86891316 Bradyrhizobium tropiciagri 312253 Bacteria Bacteria 139 1.52e-40   NR WP_212023320.1 312253 g5154 i0 97.3 0.620111731843575 74 2 62 0 96 317 1 74 WP_212023320.1 hypothetical protein [Bradyrhizobium tropiciagri] diamond 222 139 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium tropiciagri
8059953 8059953 PRJNA385396_P_NODE_10427_length_280_cov_1.425121_g10335_i0 PRJNA385396 10427 280 1.425121 3.9903388 Undibacterium squillarum 1131567 Bacteria Bacteria 169 2.59e-49   NR WP_189357975.1 1131567 g10335 i0 100 15.6 91 0 97.5 0 6 278 1 91 WP_189357975.1 protein-glutamate methylesterase/protein-glutamine glutaminase [Undibacterium squillarum] diamond 4368 169 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
8060119 8060119 PRJNA385396_P_NODE_16467_length_247_cov_0.885057_g16375_i0 PRJNA385396 16467 247 0.885057 2.18609079 Bradyrhizobium sp. 376 Bacteria Bacteria 159 2.26e-45   NR WP_298361927.1 376 g16375 i0 100 0.983805668016194 81 0 98.4 0 3 245 305 385 WP_298361927.1 dihydrolipoamide acetyltransferase family protein [Bradyrhizobium sp.] diamond 243 159 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
8729241 8729241 PRJNA385396_P_NODE_16567_length_247_cov_0.885057_g16475_i0 PRJNA385396 16567 247 0.885057 2.18609079 Bradyrhizobium roseum 3056648 Bacteria Bacteria 128 3.2999999999999997e-32   NR WP_300947674.1 3056648 g16475 i0 79.5 0.947368421052632 78 16 94.7 0 234 1 412 489 WP_300947674.1 hypothetical protein [Bradyrhizobium roseum] diamond 234 128 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium roseum
8729244 8729244 PRJNA385396_P_NODE_17267_length_246_cov_0.890173_g17175_i0 PRJNA385396 17267 246 0.890173 2.18982558 Pelomonas aquatica 431058 Bacteria Bacteria 162 4.69e-44   NR WP_277583872.1 431058 g17175 i0 100 0.98780487804878 81 0 98.8 0 244 2 3374 3454 WP_277583872.1 Ig-like domain-containing protein, partial [Pelomonas aquatica] diamond 243 162 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
8729251 8729251 PRJNA385396_P_NODE_19647_length_243_cov_0.905882_g19555_i0 PRJNA385396 19647 243 0.905882 2.20129326 Mesorhizobium sp. BH1-1-5 2876661 Bacteria Bacteria 73.9 3.84e-13   NR WP_224670302.1 2876661 g19555 i0 52.6 0.962962962962963 78 25 92.6 2 16 240 209 277 WP_224670302.1 GMC family oxidoreductase [Mesorhizobium sp. BH1-1-5] diamond 234 73.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium sp. BH1-1-5
9334805 9334805 PRJNA385396_P_NODE_10448_length_280_cov_1.115942_g10356_i0 PRJNA385396 10448 280 1.115942 3.1246376 Bradyrhizobium campsiandrae 1729892 Bacteria Bacteria 154 4.98e-45   NR WP_188104785.1 1729892 g10356 i0 97.5 0.857142857142857 80 2 85.7 0 1 240 18 97 WP_188104785.1 glutathione S-transferase family protein [Bradyrhizobium campsiandrae] diamond 240 154 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium campsiandrae
9335025 9335025 PRJNA385396_P_NODE_18248_length_245_cov_0.895349_g18156_i0 PRJNA385396 18248 245 0.895349 2.19360505 Castellaniella sp. 1955812 Bacteria Bacteria 154 1.0899999999999999e-43   NR WP_323023823.1 1955812 g18156 i0 93.8 0.991836734693878 81 5 99.2 0 1 243 121 201 WP_323023823.1 dipeptide ABC transporter permease DppB [Castellaniella sp.] diamond 243 154 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella sp.
9335060 9335060 PRJNA385396_P_NODE_19728_length_243_cov_0.905882_g19636_i0 PRJNA385396 19728 243 0.905882 2.20129326 Phyllobacterium calauticae 2817027 Bacteria Bacteria 157 3.11e-44   NR WP_223616050.1 2817027 g19636 i0 97.5 0.987654320987654 80 2 98.8 0 3 242 68 147 WP_223616050.1 amidohydrolase family protein [Phyllobacterium calauticae] diamond 240 157 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium calauticae
10610547 10610547 PRJNA385396_P_NODE_12949_length_254_cov_1.602210_g12857_i0 PRJNA385396 12949 254 1.60221 4.0696134 Undibacterium 401469 Bacteria Bacteria 141 9.45e-39   NR WP_189357611.1 1131567 g12857 i0 88.2 3.01181102362205 85 9 99.2 1 254 3 36 120 WP_189357611.1 porin [Undibacterium squillarum] diamond 765 141 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
10610686 10610686 PRJNA385396_P_NODE_1869_length_542_cov_1.070362_g1777_i0 PRJNA385396 1869 542 1.070362 5.80136204 Bradyrhizobium sp. 376 Bacteria Bacteria 335 3.45e-114   NR WP_298361924.1 376 g1777 i0 94.4 0.990774907749078 179 10 99.1 0 3 539 47 225 WP_298361924.1 enoyl-CoA hydratase/isomerase family protein [Bradyrhizobium sp.] diamond 537 335 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
10610737 10610737 PRJNA385396_P_NODE_21029_length_241_cov_0.916667_g20937_i0 PRJNA385396 21029 241 0.916667 2.20916747 Pseudochelatococcus 1654719 Bacteria Bacteria 145 3.82e-38   NR WP_377591158.1 1538102 g20937 i0 87.5 2.98755186721992 80 10 99.6 0 241 2 543 622 WP_377591158.1 transcription-repair coupling factor [Pseudochelatococcus lubricantis] diamond 720 146 0.993150684931507 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Chelatococcaceae Pseudochelatococcus Pseudochelatococcus lubricantis
11885540 11885540 PRJNA385396_P_NODE_14990_length_249_cov_0.875000_g14898_i0 PRJNA385396 14990 249 0.875 2.17875 Bradyrhizobium 374 Bacteria Bacteria 92.4 7.75e-20   NR WP_050629277.1 374 g14898 i0 97.9 0.566265060240964 47 1 56.6 0 249 109 359 405 WP_050629277.1 MULTISPECIES: ABC transporter substrate-binding protein [Bradyrhizobium] diamond 141 92.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
11885577 11885577 PRJNA385396_P_NODE_16550_length_247_cov_0.885057_g16458_i0 PRJNA385396 16550 247 0.885057 2.18609079 Methylorubrum rhodinum 29428 Bacteria Bacteria 73.9 2.31e-13   NR WP_183567175.1 29428 g16458 i0 92.5 0.48582995951417 40 3 48.6 0 121 2 1 40 WP_183567175.1 MBL fold metallo-hydrolase [Methylorubrum rhodinum] diamond 120 73.9 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
11885683 11885683 PRJNA385396_P_NODE_21310_length_241_cov_0.916667_g21218_i0 PRJNA385396 21310 241 0.916667 2.20916747 Sphingomonas arenae 2812555 Bacteria Bacteria 159 3.19e-46   NR WP_205480798.1 2812555 g21218 i0 91.1 0.983402489626556 79 7 98.3 0 3 239 122 200 WP_205480798.1 carbohydrate ABC transporter permease [Sphingomonas arenae] diamond 237 159 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas arenae
11885919 11885919 PRJNA385396_P_NODE_8090_length_309_cov_1.305085_g7998_i0 PRJNA385396 8090 309 1.305085 4.03271265 Bradyrhizobium denitrificans 2734912 Bacteria Bacteria 195 2.529999999999999e-55   NR WP_061979526.1 2734912 g7998 i0 99 0.990291262135922 102 1 99 0 3 308 188 289 WP_061979526.1 efflux RND transporter permease subunit [Bradyrhizobium denitrificans] diamond 306 195 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium denitrificans
13160699 13160699 PRJNA385396_P_NODE_20011_length_243_cov_0.905882_g19919_i0 PRJNA385396 20011 243 0.905882 2.20129326 Bradyrhizobium elkanii USDA 61 1275962 Bacteria Bacteria 155 3.029999999999999e-43   NR BBB96930.1 1275962 g19919 i0 92.5 1.96296296296296 80 6 98.8 0 242 3 34 113 BBB96930.1 cytochrome C oxidase cbb3-type subunit I [Bradyrhizobium elkanii USDA 61] diamond 477 155 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium elkanii
13160924 13160924 PRJNA385396_P_NODE_7091_length_324_cov_0.772908_g6999_i0 PRJNA385396 7091 324 0.772908 2.50422192 Methylorubrum rhodinum 29428 Bacteria Bacteria 86.3 5.48e-18   NR WP_183568607.1 29428 g6999 i0 75.3 0.75 81 15 75 1 1 243 86 161 WP_183568607.1 peptidoglycan-binding domain-containing protein [Methylorubrum rhodinum] diamond 243 86.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
13160969 13160969 PRJNA385396_P_NODE_8471_length_304_cov_1.168831_g8379_i0 PRJNA385396 8471 304 1.168831 3.55324624 Methylorubrum suomiense 144191 Bacteria Bacteria 191 8.08e-58   NR MFC7664409.1 144191 g8379 i0 93.1 1.99342105263158 101 7 99.7 0 303 1 60 160 MFC7664409.1 hypothetical protein [Methylorubrum suomiense] diamond 606 191 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum suomiense
13830024 13830024 PRJNA385396_P_NODE_12591_length_257_cov_2.320652_g12499_i0 PRJNA385396 12591 257 2.320652 5.96407564 Sphingomicrobium sp. 1940456 Bacteria Bacteria 80.1 1.59e-17   NR HJP69393.1 1940456 g12499 i0 63.3 0.700389105058366 60 21 70 1 180 1 2 60 HJP69393.1 hypothetical protein [Sphingomicrobium sp.] diamond 180 80.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomicrobium Sphingomicrobium sp.
15709513 15709513 PRJNA385396_P_NODE_12893_length_255_cov_1.098901_g12801_i0 PRJNA385396 12893 255 1.098901 2.80219755 Asticcacaulis sp. AC4 1872648 Bacteria Bacteria 87 7.66e-19   NR WP_031236018.1 1282361 g12801 i0 55.3 1 85 37 98.8 1 253 2 25 109 WP_031236018.1 Calx-beta domain-containing protein, partial [Asticcacaulis sp. AC402] diamond 255 87 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Asticcacaulis Asticcacaulis sp. AC402
15709559 15709559 PRJNA385396_P_NODE_14733_length_250_cov_0.870056_g14641_i0 PRJNA385396 14733 250 0.870056 2.17514 Phyllobacterium myrsinacearum 28101 Bacteria Bacteria 156 5.329999999999998e-42   NR WP_105733431.1 28101 g14641 i0 95.2 0.996 83 4 99.6 0 2 250 25 107 WP_105733431.1 non-ribosomal peptide synthetase [Phyllobacterium myrsinacearum] diamond 249 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Phyllobacterium Phyllobacterium myrsinacearum
15709561 15709561 PRJNA385396_P_NODE_14753_length_250_cov_0.870056_g14661_i0 PRJNA385396 14753 250 0.870056 2.17514 Methylobacterium 407 Bacteria Bacteria 88.6 2.94e-18   NR WP_339164295.1 570505 g14661 i0 59 2.976 83 33 98.4 1 3 248 304 386 WP_339164295.1 Calx-beta domain-containing protein [Methylobacterium bullatum] diamond 744 88.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium bullatum
15709632 15709632 PRJNA385396_P_NODE_17753_length_246_cov_0.890173_g17661_i0 PRJNA385396 17753 246 0.890173 2.18982558 Rhodopseudomonas infernalis 2897386 Bacteria Bacteria 134 1.7299999999999999e-34   NR WP_238738028.1 2897386 g17661 i0 96.3 0.98780487804878 81 3 98.8 0 244 2 10 90 WP_238738028.1 type I secretion system permease/ATPase [Rhodopseudomonas infernalis] diamond 243 134 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas infernalis
16379024 16379024 PRJNA385396_P_NODE_17433_length_246_cov_0.890173_g17341_i0 PRJNA385396 17433 246 0.890173 2.18982558 Gammaproteobacteria 1236 Bacteria Bacteria 119 4.839999999999999e-31   NR MDB6088472.1 1913989 g17341 i0 70.4 12.5975609756098 81 24 98.8 0 3 245 43 123 MDB6088472.1 Diaminopimelate epimerase [Gammaproteobacteria bacterium] diamond 3099 120 0.991666666666667 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
16984193 16984193 PRJNA385396_P_NODE_13414_length_251_cov_0.865169_g13322_i0 PRJNA385396 13414 251 0.865169 2.17157419 Paracoccus sphaerophysae 690417 Bacteria Bacteria 164 1.0799999999999999e-47   NR WP_036716626.1 690417 g13322 i0 100 0.99203187250996006 83 0 99.2 0 250 2 197 279 WP_036716626.1 complex I NDUFA9 subunit family protein [Paracoccus sphaerophysae] diamond 249 164 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae Paracoccus Paracoccus sphaerophysae
16984202 16984202 PRJNA385396_P_NODE_13694_length_251_cov_0.865169_g13602_i0 PRJNA385396 13694 251 0.865169 2.17157419 Methylobacterium hispanicum 270350 Bacteria Bacteria 149 2.58e-41   NR WP_331296854.1 270350 g13602 i0 92.7 0.9800796812749 82 6 98 0 247 2 133 214 WP_331296854.1 site-specific integrase [Methylobacterium hispanicum] diamond 246 149 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium hispanicum
16984375 16984375 PRJNA385396_P_NODE_21314_length_241_cov_0.916667_g21222_i0 PRJNA385396 21314 241 0.916667 2.20916747 Steroidobacteraceae bacterium 2689616 Bacteria Bacteria 135 9.52e-39   NR HUA23337.1 2689616 g21222 i0 88.6 0.983402489626556 79 9 98.3 0 239 3 50 128 HUA23337.1 type IV secretion system protein [Steroidobacteraceae bacterium] diamond 237 135 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Steroidobacterales Steroidobacteraceae   Steroidobacteraceae bacterium
17654150 17654150 PRJNA385396_P_NODE_8034_length_310_cov_0.995781_g7942_i0 PRJNA385396 8034 310 0.995781 3.0869211 Steroidobacteraceae bacterium 2689616 Bacteria Bacteria 135 4.279999999999999e-37   NR HEY2402029.1 2689616 g7942 i0 85.4 2.43870967741935 82 12 79.4 0 64 309 103 184 HEY2402029.1 SDR family oxidoreductase [Steroidobacteraceae bacterium] diamond 756 135 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Steroidobacterales Steroidobacteraceae   Steroidobacteraceae bacterium
18258480 18258480 PRJNA385396_P_NODE_20255_length_242_cov_0.911243_g20163_i0 PRJNA385396 20255 242 0.911243 2.20520806 Sphingomonas sp. 28214 Bacteria Bacteria 153 3.47e-41   NR MBY0583575.1 28214 g20163 i0 97.4 0.954545454545455 77 2 95.5 0 10 240 1 77 MBY0583575.1 penicillin acylase family protein [Sphingomonas sp.] diamond 231 153 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
18258582 18258582 PRJNA385396_P_NODE_3815_length_401_cov_0.923780_g3723_i0 PRJNA385396 3815 401 0.92378 3.7043578 Methylorubrum rhodinum 29428 Bacteria Bacteria 137 8.39e-36   NR WP_183564542.1 29428 g3723 i0 67.6 1.01745635910224 136 35 98.8 3 1 396 196 326 WP_183564542.1 thermonuclease family protein [Methylorubrum rhodinum] diamond 408 137 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
18258769 18258769 PRJNA385396_P_NODE_9195_length_294_cov_1.361991_g9103_i0 PRJNA385396 9195 294 1.361991 4.00425354 Methylorubrum rhodinum 29428 Bacteria Bacteria 143 3.22e-39   NR WP_183572154.1 29428 g9103 i0 87.7 1.48979591836735 73 9 74.5 0 292 74 270 342 WP_183572154.1 glycosyltransferase family 61 protein [Methylorubrum rhodinum] diamond 438 143 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
18928060 18928060 PRJNA385396_P_NODE_19375_length_243_cov_1.811765_g19283_i0 PRJNA385396 19375 243 1.811765 4.40258895 Bradyrhizobium 374 Bacteria Bacteria 125 7.71e-33   NR WP_061979422.1 374 g19283 i0 100 0.740740740740741 60 0 74.1 0 64 243 1 60 WP_061979422.1 MULTISPECIES: DUF692 domain-containing protein [Bradyrhizobium] diamond 180 125 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
19532661 19532661 PRJNA385396_P_NODE_13796_length_251_cov_0.865169_g13704_i0 PRJNA385396 13796 251 0.865169 2.17157419 Steroidobacteraceae bacterium 2689616 Bacteria Bacteria 107 1.83e-27   NR HWM67042.1 2689616 g13704 i0 87.3 0.657370517928287 55 7 65.7 0 171 7 83 137 HWM67042.1 CHRD domain-containing protein [Steroidobacteraceae bacterium] diamond 165 107 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Steroidobacterales Steroidobacteraceae   Steroidobacteraceae bacterium
19532680 19532680 PRJNA385396_P_NODE_14676_length_250_cov_0.870056_g14584_i0 PRJNA385396 14676 250 0.870056 2.17514 Pseudochelatococcus lubricantis 1538102 Bacteria Bacteria 84.3 6.48e-17   NR WP_377592243.1 1538102 g14584 i0 67.1 0.84 70 19 79.2 1 3 200 334 403 WP_377592243.1 aspartate aminotransferase family protein [Pseudochelatococcus lubricantis] diamond 210 84.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Chelatococcaceae Pseudochelatococcus Pseudochelatococcus lubricantis
19532721 19532721 PRJNA385396_P_NODE_16376_length_247_cov_1.724138_g16284_i0 PRJNA385396 16376 247 1.724138 4.25862086 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 155 1.24e-41   NR WP_056238498.1 1736382 g16284 i0 93.9 0.995951417004049 82 5 99.6 0 247 2 175 256 WP_056238498.1 PAS domain S-box protein [Methylobacterium sp. Leaf456] diamond 246 155 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
19532806 19532806 PRJNA385396_P_NODE_20396_length_242_cov_0.911243_g20304_i0 PRJNA385396 20396 242 0.911243 2.20520806 PVC group 1783257 Bacteria Bacteria 110 5.36e-26   NR WP_292574464.1 418 g20304 i0 68.8 21.2107438016529 80 25 99.2 0 2 241 779 858 WP_292574464.1 aconitate hydratase AcnA [Methylomonas sp.] diamond 5133 110 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Methylococcales Methylococcaceae Methylomonas Methylomonas sp.
19532820 19532820 PRJNA385396_P_NODE_21136_length_241_cov_0.916667_g21044_i0 PRJNA385396 21136 241 0.916667 2.20916747 Bradyrhizobium sp. Tv2a-2 113395 Bacteria Bacteria 146 9.65e-41   NR WP_024517179.1 113395 g21044 i0 90 0.995850622406639 80 8 99.6 0 1 240 59 138 WP_024517179.1 benzoate 1,2-dioxygenase electron transfer component BenC [Bradyrhizobium sp. Tv2a-2] diamond 240 146 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Tv2a-2
19533018 19533018 PRJNA385396_P_NODE_7116_length_323_cov_1.232000_g7024_i0 PRJNA385396 7116 323 1.232 3.97936 Undibacterium squillarum 1131567 Bacteria Bacteria 154 2.27e-43   NR WP_229793006.1 1131567 g7024 i0 93.1 0.947368421052632 102 7 94.7 0 2 307 1 102 WP_229793006.1 cell envelope integrity protein TolA [Undibacterium squillarum] diamond 306 154 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
19533109 19533109 PRJNA385396_P_NODE_9756_length_287_cov_1.439252_g9664_i0 PRJNA385396 9756 287 1.439252 4.13065324 Bradyrhizobium sp. 376 Bacteria Bacteria 149 2.989999999999999e-42   NR WP_298362101.1 376 g9664 i0 100 0.700348432055749 67 0 70 0 257 57 218 284 WP_298362101.1 VOC family protein [Bradyrhizobium sp.] diamond 201 149 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
20202672 20202672 PRJNA385396_P_NODE_12276_length_260_cov_1.647059_g12184_i0 PRJNA385396 12276 260 1.647059 4.2823534 Bradyrhizobium campsiandrae 1729892 Bacteria Bacteria 168 1.53e-47   NR WP_188106282.1 1729892 g12184 i0 97.7 0.992307692307692 86 2 99.2 0 258 1 317 402 WP_188106282.1 recombinase family protein [Bradyrhizobium campsiandrae] diamond 258 168 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium campsiandrae
20808372 20808372 PRJNA385396_P_NODE_13317_length_251_cov_1.050562_g13225_i0 PRJNA385396 13317 251 1.050562 2.63691062 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 150 1.69e-43   NR WP_298279873.1 199684 g13225 i0 97.6 0.9800796812749 82 2 98 0 6 251 1 82 WP_298279873.1 ABC transporter ATP-binding protein [uncultured Bradyrhizobium sp.] diamond 246 150 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
20808538 20808538 PRJNA385396_P_NODE_20117_length_243_cov_0.870588_g20025_i0 PRJNA385396 20117 243 0.870588 2.11552884 Sphingomonas adhaesiva 28212 Bacteria Bacteria 137 2.19e-36   NR WP_335305942.1 28212 g20025 i0 90 2.96296296296296 80 8 98.8 0 2 241 135 214 WP_335305942.1 RNA polymerase factor sigma-54 [Sphingomonas adhaesiva] diamond 720 137 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas adhaesiva
21478241 21478241 PRJNA385396_P_NODE_8417_length_305_cov_0.995690_g8325_i0 PRJNA385396 8417 305 0.99569 3.0368545 Alphaproteobacteria bacterium 1913988 Bacteria Bacteria 129 1.14e-34   NR NBB68916.1 1913988 g8325 i0 67.7 0.944262295081967 96 31 94.4 0 1 288 58 153 NBB68916.1 electron transfer flavoprotein subunit beta/FixA family protein [Alphaproteobacteria bacterium] diamond 288 129 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
22083429 22083429 PRJNA385396_P_NODE_2238_length_501_cov_0.897196_g2146_i0 PRJNA385396 2238 501 0.897196 4.49495196 Methylorubrum subtropicum 3138812 Bacteria Bacteria 264 1.0099999999999999e-87   NR WP_342152226.1 3138812 g2146 i0 84.1 1.92814371257485 157 25 94 0 20 490 1 157 WP_342152226.1 hypothetical protein [Methylorubrum subtropicum] diamond 966 264 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum subtropicum
22753433 22753433 PRJNA385396_P_NODE_5878_length_344_cov_1.483395_g5786_i0 PRJNA385396 5878 344 1.483395 5.1028788 Tardiphaga robiniae 943830 Bacteria Bacteria 194 3.8299999999999994e-55   NR WP_068737271.1 943830 g5786 i0 91.2 10.9360465116279 114 10 99.4 0 1 342 267 380 WP_068737271.1 heavy metal translocating P-type ATPase [Tardiphaga robiniae] diamond 3762 194 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Tardiphaga Tardiphaga robiniae
23358986 23358986 PRJNA385396_P_NODE_18859_length_244_cov_0.900585_g18767_i0 PRJNA385396 18859 244 0.900585 2.1974274 Phenylobacterium sp. 1871053 Bacteria Bacteria 85.1 1.9e-18   NR WP_397400938.1 1871053 g18767 i0 100 0.442622950819672 36 0 44.3 0 243 136 151 186 WP_397400938.1 HNH endonuclease [Phenylobacterium sp.] diamond 108 85.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Phenylobacterium Phenylobacterium sp.
23359015 23359015 PRJNA385396_P_NODE_19979_length_243_cov_0.905882_g19887_i0 PRJNA385396 19979 243 0.905882 2.20129326 Burkholderiales bacterium 1891238 Bacteria Bacteria 106 1.34e-26   NR MBX9812036.1 1891238 g19887 i0 97.9 0.580246913580247 47 1 58 0 243 103 165 211 MBX9812036.1 pyridoxamine 5'-phosphate oxidase [Burkholderiales bacterium] diamond 141 106 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
24633316 24633316 PRJNA385396_P_NODE_19280_length_244_cov_0.900585_g19188_i0 PRJNA385396 19280 244 0.900585 2.1974274 Rhizobium sp. CG5 2726076 Bacteria Bacteria 132 2.1e-34   NR WP_250959170.1 2726076 g19188 i0 81.3 3.90983606557377 80 15 98.4 0 242 3 357 436 WP_250959170.1 aldehyde dehydrogenase [Rhizobium sp. CG5] diamond 954 132 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Rhizobium Rhizobium sp. CG5
25302718 25302718 PRJNA385396_P_NODE_14000_length_251_cov_0.865169_g13908_i0 PRJNA385396 14000 251 0.865169 2.17157419 Bradyrhizobium sp. OHSU_III 1297865 Bacteria Bacteria 177 2.14e-51   NR WP_024584957.1 1297865 g13908 i0 98.8 9.9203187250996 83 1 99.2 0 249 1 254 336 WP_024584957.1 type I glutamate--ammonia ligase [Bradyrhizobium sp. OHSU_III] diamond 2490 177 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. OHSU_III
26632049 26632049 PRJNA385396_P_NODE_19041_length_244_cov_0.900585_g18949_i0 PRJNA385396 19041 244 0.900585 2.1974274 Rhodopseudomonas sp. AAP12 1078 Bacteria Bacteria 77.4 1.73e-14   NR WP_245290638.1 1523430 g18949 i0 100 0.909836065573771 38 0 46.7 0 3 116 342 379 WP_245290638.1 glycosyltransferase family 87 protein [Rhodopseudomonas sp. AAP120] diamond 222 77.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas sp. AAP120
26663397 26663397 PRJNA385396_P_NODE_12041_length_263_cov_1.215789_g11949_i0 PRJNA385396 12041 263 1.215789 3.19752507 Bradyrhizobium sp. 41S5 1404443 Bacteria Bacteria 142 4.439999999999999e-37   NR WP_173639493.1 1404443 g11949 i0 85.1 0.992395437262357 87 13 99.2 0 3 263 496 582 WP_173639493.1 ribosome-associated ATPase/putative transporter RbbA [Bradyrhizobium sp. 41S5] diamond 261 142 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. 41S5
26663399 26663399 PRJNA385396_P_NODE_17941_length_245_cov_0.895349_g17849_i0 PRJNA385396 17941 245 0.895349 2.19360505 Bradyrhizobium genosp. L 83637 Bacteria Bacteria 158 5.4e-43   NR WP_195785960.1 83637 g17849 i0 90.1 2.97551020408163 81 8 99.2 0 244 2 267 347 WP_195785960.1 TonB-dependent siderophore receptor [Bradyrhizobium genosp. L] diamond 729 158 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium genosp. L
26663400 26663400 PRJNA385396_P_NODE_19121_length_244_cov_0.900585_g19029_i0 PRJNA385396 19121 244 0.900585 2.1974274 Rhodopseudomonas pseudopalustris 1513892 Bacteria Bacteria 156 1.07e-46   NR WP_062313680.1 1513892 g19029 i0 100 0.922131147540984 75 0 92.2 0 2 226 102 176 WP_062313680.1 conjugative transfer signal peptidase TraF [Rhodopseudomonas pseudopalustris] diamond 225 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas pseudopalustris
26663401 26663401 PRJNA385396_P_NODE_20741_length_242_cov_0.911243_g20649_i0 PRJNA385396 20741 242 0.911243 2.20520806 Methylorubrum populi 223967 Bacteria Bacteria 110 5.89e-26   NR WP_063987061.1 223967 g20649 i0 92.9 0.867768595041322 70 5 86.8 0 6 215 497 566 WP_063987061.1 PAS domain-containing methyl-accepting chemotaxis protein [Methylorubrum populi] diamond 210 110 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum populi
26663403 26663403 PRJNA385396_P_NODE_6161_length_339_cov_1.312030_g6069_i0 PRJNA385396 6161 339 1.31203 4.4477817 Bradyrhizobium campsiandrae 1729892 Bacteria Bacteria 102 8.46e-26   NR WP_188108352.1 1729892 g6069 i0 83.6 0.539823008849557 61 10 54 0 2 184 20 80 WP_188108352.1 hypothetical protein [Bradyrhizobium campsiandrae] diamond 183 102 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium campsiandrae
26726637 26726637 PRJNA385396_P_NODE_13241_length_251_cov_1.730337_g13149_i0 PRJNA385396 13241 251 1.730337 4.34314587 Bradyrhizobium sp. SK17 2057741 Bacteria Bacteria 140 1.6200000000000002e-36   NR WP_100954640.1 2057741 g13149 i0 86.7 0.99203187250996006 83 11 99.2 0 3 251 307 389 WP_100954640.1 NF038122 family metalloprotease [Bradyrhizobium sp. SK17] diamond 249 140 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. SK17
26726639 26726639 PRJNA385396_P_NODE_17301_length_246_cov_0.890173_g17209_i0 PRJNA385396 17301 246 0.890173 2.18982558 Zoogloea sp. 1C4 2570190 Bacteria Bacteria 116 5.8099999999999994e-30   NR WP_153160004.1 2570190 g17209 i0 100 0.695121951219512 57 0 69.5 0 172 2 1 57 WP_153160004.1 hypothetical protein [Zoogloea sp. 1C4] diamond 171 116 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Zoogloeaceae Zoogloea Zoogloea sp. 1C4
26790492 26790492 PRJNA385396_P_NODE_9281_length_293_cov_1.245455_g9189_i0 PRJNA385396 9281 293 1.245455 3.64918315 Bradyrhizobium iriomotense 441950 Bacteria Bacteria 154 8.05e-45   NR GLR85939.1 441950 g9189 i0 81.1 1.83276450511945 90 12 87 1 291 37 139 228 GLR85939.1 hypothetical protein GCM10007857_26500 [Bradyrhizobium iriomotense] diamond 537 154 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium iriomotense
26822198 26822198 PRJNA385396_P_NODE_7841_length_312_cov_2.225941_g7749_i0 PRJNA385396 7841 312 2.225941 6.94493592 Bradyrhizobium 374 Bacteria Bacteria 196 4.17e-57   NR WP_028343088.1 374 g7749 i0 87.4 0.990384615384615 103 13 99 0 3 311 346 448 WP_028343088.1 MULTISPECIES: asparagine synthase (glutamine-hydrolyzing) [Bradyrhizobium] diamond 309 196 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
26853956 26853956 PRJNA385396_P_NODE_10921_length_274_cov_1.990050_g10829_i0 PRJNA385396 10921 274 1.99005 5.452737 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 162 9.55e-47   NR WP_298277621.1 199684 g10829 i0 96.7 0.996350364963504 91 3 99.6 0 273 1 13 103 WP_298277621.1 plasmid partitioning protein RepB [uncultured Bradyrhizobium sp.] diamond 273 162 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
26885568 26885568 PRJNA385396_P_NODE_16421_length_247_cov_1.201149_g16329_i0 PRJNA385396 16421 247 1.201149 2.96683803 Bradyrhizobium sp. 376 Bacteria Bacteria 163 1.04e-45   NR WP_298362392.1 376 g16329 i0 98.8 0.995951417004049 82 1 99.6 0 2 247 115 196 WP_298362392.1 flavin-containing monooxygenase [Bradyrhizobium sp.] diamond 246 163 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
26885569 26885569 PRJNA385396_P_NODE_4101_length_390_cov_1.283912_g4009_i0 PRJNA385396 4101 390 1.283912 5.0072568 Methylorubrum rhodinum 29428 Bacteria Bacteria 163 1.3399999999999996e-43   NR WP_183565086.1 29428 g4009 i0 73.5 0.9 117 31 90 0 36 386 1682 1798 WP_183565086.1 hypothetical protein [Methylorubrum rhodinum] diamond 351 163 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
26948532 26948532 PRJNA385396_P_NODE_13442_length_251_cov_0.865169_g13350_i0 PRJNA385396 13442 251 0.865169 2.17157419 Rhodopseudomonas pseudopalustris 1513892 Bacteria Bacteria 143 6.279999999999999e-40   NR WP_062313638.1 1513892 g13350 i0 98.5 0.812749003984064 68 1 81.3 0 206 3 1 68 WP_062313638.1 NAD(P)/FAD-dependent oxidoreductase [Rhodopseudomonas pseudopalustris] diamond 204 143 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Rhodopseudomonas Rhodopseudomonas pseudopalustris
26980220 26980220 PRJNA385396_P_NODE_10862_length_275_cov_1.410891_g10770_i0 PRJNA385396 10862 275 1.410891 3.87995025 Bradyrhizobium 374 Bacteria Bacteria 58.5 2.9e-8   NR WP_231164173.1 374 g10770 i0 86.7 1.96363636363636 30 4 32.7 0 275 186 127 156 WP_231164173.1 MULTISPECIES: hypothetical protein [Bradyrhizobium] diamond 540 58.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
26980222 26980222 PRJNA385396_P_NODE_15222_length_249_cov_0.875000_g15130_i0 PRJNA385396 15222 249 0.875 2.17875 Gammaproteobacteria bacterium 1913989 Bacteria Bacteria 46.6 0.00106   NR MFP5391473.1 1913989 g15130 i0 38.3 0.975903614457831 81 41 97.6 3 249 7 50 121 MFP5391473.1 PEP-CTERM sorting domain-containing protein [Gammaproteobacteria bacterium] diamond 243 46.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
26980224 26980224 PRJNA385396_P_NODE_20962_length_241_cov_1.511905_g20870_i0 PRJNA385396 20962 241 1.511905 3.64369105 Methylorubrum rhodinum 29428 Bacteria Bacteria 137 1.4099999999999998e-37   NR WP_183571957.1 29428 g20870 i0 91.1 0.983402489626556 79 7 98.3 0 239 3 188 266 WP_183571957.1 lysylphosphatidylglycerol synthase domain-containing protein [Methylorubrum rhodinum] diamond 237 137 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
27075202 27075202 PRJNA385396_P_NODE_12362_length_259_cov_2.446237_g12270_i0 PRJNA385396 12362 259 2.446237 6.33575383 Bradyrhizobium liaoningense 43992 Bacteria Bacteria 84.7 3.91e-17   NR WP_212432090.1 43992 g12270 i0 51.2 0.996138996138996 86 39 98.5 2 257 3 181 264 WP_212432090.1 DnaA N-terminal domain-containing protein [Bradyrhizobium liaoningense] diamond 258 84.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium liaoningense
27075203 27075203 PRJNA385396_P_NODE_16582_length_247_cov_0.885057_g16490_i0 PRJNA385396 16582 247 0.885057 2.18609079 Parvularculaceae bacterium 2510335 Bacteria Bacteria 48.1 2.46e-4   NR MEZ5982563.1 2510335 g16490 i0 43.8 1.96761133603239 80 38 89.9 3 227 6 48 126 MEZ5982563.1 prolyl-tRNA synthetase associated domain-containing protein [Parvularculaceae bacterium] diamond 486 48.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Parvularculales Parvularculaceae   Parvularculaceae bacterium
27154864 27154864 PRJNA385396_P_NODE_14202_length_250_cov_0.870056_g14110_i0 PRJNA385396 14202 250 0.870056 2.17514 Undibacterium 401469 Bacteria Bacteria 114 3.69e-27   NR WP_189356211.1 1131567 g14110 i0 98.5 1.608 67 1 80.4 0 202 2 1 67 WP_189356211.1 S53 family peptidase [Undibacterium squillarum] diamond 402 114 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Oxalobacteraceae Undibacterium Undibacterium squillarum
27201439 27201439 PRJNA385396_P_NODE_15002_length_249_cov_0.875000_g14910_i0 PRJNA385396 15002 249 0.875 2.17875 Methylorubrum rhodinum 29428 Bacteria Bacteria 49.3 1.19e-4   NR WP_183564991.1 29428 g14910 i0 54 0.602409638554217 50 22 60.2 1 249 100 149 197 WP_183564991.1 lysozyme [Methylorubrum rhodinum] diamond 150 49.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
27201441 27201441 PRJNA385396_P_NODE_18802_length_244_cov_0.900585_g18710_i0 PRJNA385396 18802 244 0.900585 2.1974274 Paracoccaceae bacterium 1904441 Bacteria Bacteria 111 1.12e-26   NR MCR9151482.1 1904441 g18710 i0 81.9 1.77049180327869 72 13 88.5 0 244 29 10 81 MCR9151482.1 amidase [Paracoccaceae bacterium] diamond 432 111 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodobacterales Paracoccaceae   Paracoccaceae bacterium
27328201 27328201 PRJNA385396_P_NODE_1323_length_625_cov_88.440217_g1232_i0 PRJNA385396 1323 625 88.440217 552.75135625 Enterobacter hormaechei 158836 Bacteria Bacteria 125 4.5e-33   NR WP_096179768.1 158836 g1232 i0 96.4 0.5376 112 4 53.8 0 288 623 1 112 WP_096179768.1 hypothetical protein, partial [Enterobacter hormaechei] diamond 336 125 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Enterobacter Enterobacter hormaechei
27408382 27408382 PRJNA385396_P_NODE_18503_length_245_cov_0.895349_g18411_i0 PRJNA385396 18503 245 0.895349 2.19360505 Aestuariivirga 2650923 Bacteria Bacteria 64.7 3.59e-10   NR MCB1377775.1 1913988 g18411 i0 52.7 2.71836734693878 74 30 90.6 1 22 243 60 128 MCB1377775.1 glucose 1-dehydrogenase [Alphaproteobacteria bacterium] diamond 666 64.7 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria       Alphaproteobacteria bacterium
27486039 27486039 PRJNA385396_P_NODE_12383_length_259_cov_1.655914_g12291_i0 PRJNA385396 12383 259 1.655914 4.28881726 Methylorubrum rhodinum 29428 Bacteria Bacteria 44.3 9e-4   NR WP_183565606.1 29428 g12291 i0 82.6 0.266409266409266 23 4 26.6 0 73 5 1 23 WP_183565606.1 hypothetical protein [Methylorubrum rhodinum] diamond 69 44.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
27517614 27517614 PRJNA385396_P_NODE_10743_length_276_cov_1.517241_g10651_i0 PRJNA385396 10743 276 1.517241 4.18758516 Bradyrhizobium tropiciagri 312253 Bacteria Bacteria 151 2.85e-44   NR WP_157863225.1 312253 g10651 i0 93.7 1.71739130434783 79 5 85.9 0 275 39 107 185 WP_157863225.1 4Fe-4S dicluster domain-containing protein [Bradyrhizobium tropiciagri] diamond 474 151 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium tropiciagri

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;