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contig_metadata

19 rows where analysis = "diamond", bioproject = "PRJNA385396" and tax_phylum = "Oomycota"

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tax_superkingdom 1

tax_phylum 1

  • Oomycota · 19 ✖

tax_clade 1

bioproject 1

  • PRJNA385396 · 19 ✖

analysis 1

  • diamond · 19 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
13830054 13830054 PRJNA385396_P_NODE_9111_length_295_cov_1.373874_g9019_i0 PRJNA385396 9111 295 1.373874 4.0529283 Saprolegnia parasitica CBS 223.65 695850 SAR_Eukaryotes SAR_Eukaryotes 184 1.8199999999999997e-57   NR XP_012206797.1 695850 g9019 i0 96.9 0.996610169491525 98 3 99.7 0 295 2 1 98 XP_012206797.1 60S ribosomal protein L12 [Saprolegnia parasitica CBS 223.65] diamond 294 184 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Saprolegniaceae Saprolegnia Saprolegnia parasitica
14435795 14435795 PRJNA385396_P_NODE_2772_length_456_cov_1.501305_g2680_i0 PRJNA385396 2772 456 1.501305 6.8459508 Peronosporomycetes 3418804 SAR_Eukaryotes SAR_Eukaryotes 122 2.34e-32   NR KAJ0405433.1 114742 g2680 i0 58.5 3.88157894736842 118 48 77.6 1 454 101 19 135 KAJ0405433.1 hypothetical protein P43SY_005052 [Pythium insidiosum] diamond 1770 122 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium insidiosum
16379021 16379021 PRJNA385396_P_NODE_16513_length_247_cov_0.885057_g16421_i0 PRJNA385396 16513 247 0.885057 2.18609079 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 129 1.69e-35   NR XP_008878394.1 157072 g16421 i0 72 0.995951417004049 82 19 99.6 1 2 247 25 102 XP_008878394.1 hypothetical protein H310_12906 [Aphanomyces invadans] diamond 246 129 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
26758602 26758602 PRJNA385396_P_NODE_21561_length_241_cov_0.916667_g21469_i0 PRJNA385396 21561 241 0.916667 2.20916747 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 65.5 3.37e-10   NR RHY30613.1 157072 g21469 i0 74.7 0.983402489626556 79 20 98.3 0 3 239 51 129 RHY30613.1 hypothetical protein DYB32_004189 [Aphanomyces invadans] diamond 237 65.5 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
27264935 27264935 PRJNA385396_P_NODE_13983_length_251_cov_0.865169_g13891_i0 PRJNA385396 13983 251 0.865169 2.17157419 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 90.9 2.99e-20   NR KAF0690126.1 120398 g13891 i0 57.8 0.99203187250996006 83 32 95.6 1 6 245 7 89 KAF0690126.1 hypothetical protein As57867_018389 [Aphanomyces stellatus] diamond 249 90.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
27454633 27454633 PRJNA385396_P_NODE_11243_length_271_cov_1.363636_g11151_i0 PRJNA385396 11243 271 1.363636 3.69545356 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 70.9 5.81e-12   NR KAF0686091.1 120398 g11151 i0 53.1 1.08487084870849 98 37 98.5 3 4 270 8 105 KAF0686091.1 hypothetical protein As57867_021987 [Aphanomyces stellatus] diamond 294 70.9 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
27517615 27517615 PRJNA385396_P_NODE_13583_length_251_cov_0.865169_g13491_i0 PRJNA385396 13583 251 0.865169 2.17157419 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 140 1.15e-38   NR RHY26867.1 157072 g13491 i0 85.5 1.9840637450199201 83 12 99.2 0 249 1 89 171 RHY26867.1 hypothetical protein DYB32_007220 [Aphanomyces invadans] diamond 498 140 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
27692586 27692586 PRJNA385396_P_NODE_17264_length_246_cov_0.890173_g17172_i0 PRJNA385396 17264 246 0.890173 2.18982558 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 55.8 9.19e-7   NR KAG9415638.1 112091 g17172 i0 48.6 1.9390243902439 72 34 86.6 2 214 2 458 527 KAG9415638.1 hypothetical protein AC1031_000021 [Aphanomyces cochlioides] diamond 477 55.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
27770402 27770402 PRJNA385396_P_NODE_8244_length_307_cov_1.294872_g8152_i0 PRJNA385396 8244 307 1.294872 3.97525704 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 176 1.2199999999999999e-54   NR KAG9413149.1 112091 g8152 i0 82.4 2.99022801302932 102 18 99.7 0 306 1 6 107 KAG9413149.1 Cytochrome c oxidase subunit 5B [Aphanomyces cochlioides] diamond 918 176 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
28039676 28039676 PRJNA385396_P_NODE_14625_length_250_cov_0.870056_g14533_i0 PRJNA385396 14625 250 0.870056 2.17514 Aphanomyces 100860 SAR_Eukaryotes SAR_Eukaryotes 112 7.12e-27   NR KAH9081102.1 100861 g14533 i0 64.6 3.912 82 29 98.4 0 248 3 15 96 KAH9081102.1 hypothetical protein Ae201684P_012074 [Aphanomyces euteiches] diamond 978 112 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
28370028 28370028 PRJNA385396_P_NODE_17726_length_246_cov_0.890173_g17634_i0 PRJNA385396 17726 246 0.890173 2.18982558 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 71.6 1.29e-13   NR KAF0698374.1 120398 g17634 i0 55.4 0.792682926829268 65 27 78 2 196 5 50 113 KAF0698374.1 hypothetical protein As57867_010959 [Aphanomyces stellatus] diamond 195 71.6 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
29001976 29001976 PRJNA385396_P_NODE_14968_length_249_cov_0.875000_g14876_i0 PRJNA385396 14968 249 0.875 2.17875 Aphanomyces invadans 157072 SAR_Eukaryotes SAR_Eukaryotes 162 3.54e-44   NR RHY31415.1 157072 g14876 i0 89 5.92771084337349 82 9 98.8 0 247 2 1012 1093 RHY31415.1 hypothetical protein DYB32_003508 [Aphanomyces invadans] diamond 1476 162 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces invadans
30360052 30360052 PRJNA385396_P_NODE_16912_length_247_cov_0.885057_g16820_i0 PRJNA385396 16912 247 0.885057 2.18609079 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 145 4.15e-41   NR KAF0685570.1 120398 g16820 i0 97.3 1.76113360323887 73 2 88.7 0 246 28 214 286 KAF0685570.1 hypothetical protein As57867_022508 [Aphanomyces stellatus] diamond 435 145 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
30517553 30517553 PRJNA385396_P_NODE_19153_length_244_cov_0.900585_g19061_i0 PRJNA385396 19153 244 0.900585 2.1974274 Aphanomyces stellatus 120398 SAR_Eukaryotes SAR_Eukaryotes 97.4 8.84e-22   NR KAF0690133.1 120398 g19061 i0 72.1 0.836065573770492 68 19 83.6 0 204 1 25 92 KAF0690133.1 hypothetical protein As57867_018396 [Aphanomyces stellatus] diamond 204 97.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces stellatus
30850314 30850314 PRJNA385396_P_NODE_1814_length_550_cov_0.966457_g1722_i0 PRJNA385396 1814 550 0.966457 5.3155135 Oomycota 4762 SAR_Eukaryotes SAR_Eukaryotes 107 3.5199999999999996e-24   NR XP_067823137.1 4779 g1722 i0 37.4 13.3636363636364 179 94 88.4 3 8 493 163 340 XP_067823137.1 uncharacterized protein CCR75_003021 [Bremia lactucae] diamond 7350 107 1 Eukaryota Sar   Oomycota Peronosporomycetes Peronosporales Peronosporaceae Bremia Bremia lactucae
30959969 30959969 PRJNA385396_P_NODE_21114_length_241_cov_0.916667_g21022_i0 PRJNA385396 21114 241 0.916667 2.20916747 Aphanomyces astaci 112090 SAR_Eukaryotes SAR_Eukaryotes 87.8 1.68e-18   NR XP_009840076.1 112090 g21022 i0 63 1.81742738589212 73 27 90.9 0 233 15 15 87 XP_009840076.1 hypothetical protein H257_14051 [Aphanomyces astaci] diamond 438 87.8 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces astaci
32193363 32193363 PRJNA385396_P_NODE_13818_length_251_cov_0.865169_g13726_i0 PRJNA385396 13818 251 0.865169 2.17157419 Aphanomyces euteiches 100861 SAR_Eukaryotes SAR_Eukaryotes 89.4 1.45e-18   NR KAH9094823.1 100861 g13726 i0 58.3 1.00398406374502 84 24 93.2 3 235 2 234 312 KAH9094823.1 hypothetical protein LEN26_018077 [Aphanomyces euteiches] diamond 252 89.4 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces euteiches
32256945 32256945 PRJNA385396_P_NODE_15018_length_249_cov_0.875000_g14926_i0 PRJNA385396 15018 249 0.875 2.17875 Aphanomyces cochlioides 112091 SAR_Eukaryotes SAR_Eukaryotes 154 5.0599999999999995e-45   NR KAG9405873.1 112091 g14926 i0 84.1 0.987951807228916 82 13 98.8 0 248 3 49 130 KAG9405873.1 hypothetical protein AC1031_003791 [Aphanomyces cochlioides] diamond 246 154 1 Eukaryota Sar   Oomycota Saprolegniomycetes Saprolegniales Verrucalvaceae Aphanomyces Aphanomyces cochlioides
32383120 32383120 PRJNA385396_P_NODE_11639_length_267_cov_1.329897_g11547_i0 PRJNA385396 11639 267 1.329897 3.55082499 Pythium oligandrum 41045 SAR_Eukaryotes SAR_Eukaryotes 43.5 0.0275   NR TMW62031.1 41045 g11547 i0 29.8 0.943820224719101 84 56 91 1 23 265 1338 1421 TMW62031.1 hypothetical protein Poli38472_009524 [Pythium oligandrum] diamond 252 43.5 1 Eukaryota Sar   Oomycota Peronosporomycetes Pythiales Pythiaceae Pythium Pythium oligandrum

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;