contig_metadata
15 rows where analysis = "diamond", bioproject = "PRJNA385396" and tax_phylum = "Myxococcota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4234109 | 4234109 | PRJNA385396_P_NODE_2804_length_454_cov_1.089239_g2712_i0 | PRJNA385396 | 2804 | 454 | 1.089239 | 4.94514506 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 64.7 | 4.06e-9 | NR | MEO9234664.1 | 2268199 | g2712 | i0 | 48.5 | 1.34801762114537 | 66 | 32 | 42.3 | 1 | 232 | 423 | 28 | 93 | MEO9234664.1 hypothetical protein [Polyangiaceae bacterium] | diamond | 612 | 64.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 19532935 | 19532935 | PRJNA385396_P_NODE_4756_length_371_cov_1.003356_g4664_i0 | PRJNA385396 | 4756 | 371 | 1.003356 | 3.72245076 | Pseudomonadati | 3379134 | Bacteria | Bacteria | 59.3 | 2.67e-7 | NR | MBI5506042.1 | 2026735 | g4664 | i0 | 41.3 | 3.88140161725067 | 121 | 61 | 95.4 | 4 | 370 | 17 | 2272 | 2385 | MBI5506042.1 DUF11 domain-containing protein [Deltaproteobacteria bacterium] | diamond | 1440 | 59.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 24028300 | 24028300 | PRJNA385396_P_NODE_7159_length_323_cov_0.888000_g7067_i0 | PRJNA385396 | 7159 | 323 | 0.888 | 2.86824 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 193 | 2.0099999999999997e-57 | NR | MBI3759687.1 | 2026735 | g7067 | i0 | 91.5 | 2.95356037151703 | 106 | 9 | 98.5 | 0 | 321 | 4 | 260 | 365 | MBI3759687.1 TolC family protein [Deltaproteobacteria bacterium] | diamond | 954 | 193 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 27075204 | 27075204 | PRJNA385396_P_NODE_19782_length_243_cov_0.905882_g19690_i0 | PRJNA385396 | 19782 | 243 | 0.905882 | 2.20129326 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 53.1 | 1.66e-6 | NR | MEO1912235.1 | 2026763 | g19690 | i0 | 56.1 | 1.62962962962963 | 66 | 28 | 81.5 | 1 | 35 | 232 | 56 | 120 | MEO1912235.1 DUF4202 family protein [Myxococcales bacterium] | diamond | 396 | 53.1 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 28418730 | 28418730 | PRJNA385396_P_NODE_12406_length_259_cov_1.489247_g12314_i0 | PRJNA385396 | 12406 | 259 | 1.489247 | 3.85714973 | Bacteria | 2 | Bacteria | Bacteria | 56.6 | 4.72e-7 | NR | TVR04301.1 | 2026735 | g12314 | i0 | 42.9 | 2.83783783783784 | 77 | 44 | 89.2 | 0 | 6 | 236 | 148 | 224 | TVR04301.1 MAG: SDR family NAD(P)-dependent oxidoreductase [Deltaproteobacteria bacterium] | diamond | 735 | 57 | 0.992982456140351 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 28464956 | 28464956 | PRJNA385396_P_NODE_19946_length_243_cov_0.905882_g19854_i0 | PRJNA385396 | 19946 | 243 | 0.905882 | 2.20129326 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 54.3 | 3e-6 | NR | HEY6176146.1 | 2212474 | g19854 | i0 | 77.4 | 0.382716049382716 | 31 | 7 | 38.3 | 0 | 146 | 238 | 3 | 33 | HEY6176146.1 sigma-54 dependent transcriptional regulator [Kofleriaceae bacterium] | diamond | 93 | 54.3 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 28496518 | 28496518 | PRJNA385396_P_NODE_18247_length_245_cov_0.895349_g18155_i0 | PRJNA385396 | 18247 | 245 | 0.895349 | 2.19360505 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 150 | 1.2899999999999997e-42 | NR | HWA77766.1 | 2268199 | g18155 | i0 | 86.4 | 1.98367346938776 | 81 | 11 | 99.2 | 0 | 243 | 1 | 121 | 201 | HWA77766.1 UDP-glucose 4-epimerase GalE [Polyangiaceae bacterium] | diamond | 486 | 150 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 29001977 | 29001977 | PRJNA385396_P_NODE_8728_length_300_cov_2.709251_g8636_i0 | PRJNA385396 | 8728 | 300 | 2.709251 | 8.127753 | Sorangium cellulosum | 56 | Bacteria | Bacteria | 52.4 | 3e-5 | NR | WP_159396632.1 | 56 | g8636 | i0 | 42.9 | 1.6 | 77 | 38 | 71 | 1 | 12 | 224 | 643 | 719 | WP_159396632.1 MXAN_6577-like cysteine-rich protein [Sorangium cellulosum] | diamond | 480 | 52.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Sorangium | Sorangium cellulosum | |||
| 29601192 | 29601192 | PRJNA385396_P_NODE_13290_length_251_cov_1.297753_g13198_i0 | PRJNA385396 | 13290 | 251 | 1.297753 | 3.25736003 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 42.7 | 0.0415 | NR | HMC33073.1 | 2026763 | g13198 | i0 | 36.1 | 0.99203187250996006 | 83 | 41 | 86.1 | 3 | 20 | 235 | 121 | 202 | HMC33073.1 hypothetical protein [Myxococcales bacterium] | diamond | 249 | 42.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 30296854 | 30296854 | PRJNA385396_P_NODE_4152_length_388_cov_3.022222_g4060_i0 | PRJNA385396 | 4152 | 388 | 3.022222 | 11.72622136 | Myxococcota bacterium | 2818507 | Bacteria | Bacteria | 50.4 | 2.85e-5 | NR | MDJ0761680.1 | 2818507 | g4060 | i0 | 51.2 | 0.332474226804124 | 43 | 21 | 33.2 | 0 | 139 | 11 | 41 | 83 | MDJ0761680.1 hypothetical protein [Myxococcota bacterium] | diamond | 129 | 50.4 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcota bacterium | ||||||
| 30770471 | 30770471 | PRJNA385396_P_NODE_17014_length_247_cov_0.885057_g16922_i0 | PRJNA385396 | 17014 | 247 | 0.885057 | 2.18609079 | Kofleriaceae bacterium | 2212474 | Bacteria | Bacteria | 115 | 7.49e-28 | NR | HUQ06442.1 | 2212474 | g16922 | i0 | 98.1 | 0.65587044534413 | 54 | 1 | 65.6 | 0 | 247 | 86 | 863 | 916 | HUQ06442.1 tetratricopeptide repeat protein [Kofleriaceae bacterium] | diamond | 162 | 115 | 1 | Bacteria | Pseudomonadati | Myxococcota | Haliangiales | Kofleriaceae | Kofleriaceae bacterium | ||||
| 31402610 | 31402610 | PRJNA385396_P_NODE_6616_length_331_cov_1.193798_g6524_i0 | PRJNA385396 | 6616 | 331 | 1.193798 | 3.95147138 | Deltaproteobacteria bacterium | 2026735 | Bacteria | Bacteria | 44.7 | 0.0226 | NR | MBI2394944.1 | 2026735 | g6524 | i0 | 30.8 | 2.16616314199396 | 117 | 68 | 95.2 | 4 | 330 | 16 | 846 | 961 | MBI2394944.1 hypothetical protein [Deltaproteobacteria bacterium] | diamond | 717 | 44.7 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Deltaproteobacteria bacterium | |||||
| 31687024 | 31687024 | PRJNA385396_P_NODE_3857_length_399_cov_0.944785_g3765_i0 | PRJNA385396 | 3857 | 399 | 0.944785 | 3.76969215 | Myxococcales bacterium | 2026763 | Bacteria | Bacteria | 188 | 9.819999999999998e-56 | NR | MDH5675607.1 | 2026763 | g3765 | i0 | 71 | 1.96240601503759 | 131 | 37 | 98.5 | 1 | 2 | 394 | 8 | 137 | MDH5675607.1 acetyl-CoA C-acetyltransferase [Myxococcales bacterium] | diamond | 783 | 188 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Myxococcales bacterium | ||||
| 32288575 | 32288575 | PRJNA385396_P_NODE_20579_length_242_cov_0.911243_g20487_i0 | PRJNA385396 | 20579 | 242 | 0.911243 | 2.20520806 | Polyangiaceae bacterium | 2268199 | Bacteria | Bacteria | 60.5 | 2.06e-8 | NR | HWA75240.1 | 2268199 | g20487 | i0 | 38 | 0.979338842975207 | 79 | 40 | 93 | 2 | 240 | 16 | 266 | 339 | HWA75240.1 serine/threonine-protein kinase [Polyangiaceae bacterium] | diamond | 237 | 60.5 | 1 | Bacteria | Pseudomonadati | Myxococcota | Polyangiales | Polyangiaceae | Polyangiaceae bacterium | ||||
| 32414921 | 32414921 | PRJNA385396_P_NODE_10519_length_279_cov_1.233010_g10427_i0 | PRJNA385396 | 10519 | 279 | 1.23301 | 3.4400979 | Archangium sp. | 1872627 | Bacteria | Bacteria | 57.8 | 3.03e-7 | NR | MDP1826071.1 | 1872627 | g10427 | i0 | 42.9 | 0.903225806451613 | 84 | 43 | 86 | 4 | 40 | 279 | 163 | 245 | MDP1826071.1 hypothetical protein [Archangium sp.] | diamond | 252 | 57.8 | 1 | Bacteria | Pseudomonadati | Myxococcota | Myxococcia | Myxococcales | Archangiaceae | Archangium | Archangium sp. |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;