RNAquarium Metadata Server
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contig_metadata

2 rows where analysis = "diamond", bioproject = "PRJNA385396" and tax_phylum = "Lenarviricota"

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tax_superkingdom 1

tax_phylum 1

  • Lenarviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385396 · 2 ✖

analysis 1

  • diamond · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27833241 27833241 PRJNA385396_P_NODE_17504_length_246_cov_0.890173_g17412_i0 PRJNA385396 17504 246 0.890173 2.18982558 Fusarium culmorum narnavirus 1 3233852 Viruses Viruses 86.7 1.34e-17   NR XCO56019.1 3233852 g17412 i0 57.1 0.939024390243902 77 33 93.9 0 2 232 462 538 XCO56019.1 MAG: putative coat protein [Fusarium culmorum narnavirus 1] diamond 231 86.7 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales     Fusarium culmorum narnavirus 1
29128093 29128093 PRJNA385396_P_NODE_7409_length_319_cov_1.195122_g7317_i0 PRJNA385396 7409 319 1.195122 3.81243918 Fusarium culmorum narnavirus 1 3233852 Viruses Viruses 56.6 1.24e-6   NR XCO56019.1 3233852 g7317 i0 35.9 0.968652037617555 103 63 96.9 1 10 318 542 641 XCO56019.1 MAG: putative coat protein [Fusarium culmorum narnavirus 1] diamond 309 56.6 1 Viruses   Orthornavirae Lenarviricota Amabiliviricetes Wolframvirales     Fusarium culmorum narnavirus 1

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;