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2,237 rows where analysis = "diamond", bioproject = "PRJNA385073" and tax_phylum = "Pseudomonadota"

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tax_superkingdom 1

tax_phylum 1

  • Pseudomonadota · 2,237 ✖

tax_kingdom 1

bioproject 1

  • PRJNA385073 · 2,237 ✖

analysis 1

  • diamond · 2,237 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
405468 405468 PRJNA385073_P_NODE_13241_length_367_cov_4.040816_g13080_i0 PRJNA385073 13241 367 4.040816 14.82979472 Bradyrhizobium sp. UFLA 376 Bacteria Bacteria 247 1.1e-80   NR WP_095733010.1 418599 g13080 i0 99.2 0.997275204359673 122 1 99.7 0 2 367 120 241 WP_095733010.1 SDR family NAD(P)-dependent oxidoreductase [Bradyrhizobium sp. UFLA03-84] diamond 366 247 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. UFLA03-84
405545 405545 PRJNA385073_P_NODE_17421_length_334_cov_4.107280_g17260_i0 PRJNA385073 17421 334 4.10728 13.7183152 Bradyrhizobium 374 Bacteria Bacteria 224 5.52e-71   NR WP_061979422.1 374 g17260 i0 100 0.988023952095808 110 0 98.8 0 5 334 143 252 WP_061979422.1 MULTISPECIES: DUF692 domain-containing protein [Bradyrhizobium] diamond 330 224 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
405622 405622 PRJNA385073_P_NODE_20721_length_314_cov_5.937759_g20559_i0 PRJNA385073 20721 314 5.937759 18.64456326 Bradyrhizobium sp. 376 Bacteria Bacteria 201 3.28e-63   NR MFN5714718.1 376 g20559 i0 98.1 1.98726114649682 104 2 99.4 0 3 314 5 108 MFN5714718.1 DnaB-like helicase N-terminal domain-containing protein [Bradyrhizobium sp.] diamond 624 201 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
405824 405824 PRJNA385073_P_NODE_29621_length_280_cov_1.487923_g29459_i0 PRJNA385073 29621 280 1.487923 4.1661844 Sphingomonadales 204457 Bacteria Bacteria 167 4.029999999999999e-46   NR WP_374134959.1 28214 g29459 i0 100 1.97142857142857 92 0 98.6 0 3 278 252 343 WP_374134959.1 protein-disulfide reductase DsbD family protein [Sphingomonas sp.] diamond 552 167 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
405840 405840 PRJNA385073_P_NODE_30521_length_277_cov_2.367647_g30359_i0 PRJNA385073 30521 277 2.367647 6.55838219 Methylibium sp. 2067992 Bacteria Bacteria 176 2.9699999999999996e-54   NR MBA4217744.1 2067992 g30359 i0 98.9 0.963898916967509 89 1 96.4 0 10 276 1 89 MBA4217744.1 HIT domain-containing protein [Methylibium sp.] diamond 267 176 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Methylibium Methylibium sp.
405843 405843 PRJNA385073_P_NODE_30581_length_277_cov_1.941176_g30419_i0 PRJNA385073 30581 277 1.941176 5.37705752 Salinisphaera 180541 Bacteria Bacteria 148 9.86e-40   NR WP_162622920.1 856731 g30419 i0 81.3 5.8158844765343 91 17 98.6 0 275 3 183 273 WP_162622920.1 MobH family relaxase [Salinisphaera orenii] diamond 1611 148 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Salinisphaerales Salinisphaeraceae Salinisphaera Salinisphaera orenii
405865 405865 PRJNA385073_P_NODE_31581_length_274_cov_2.427861_g31419_i0 PRJNA385073 31581 274 2.427861 6.65233914 Azonexus caeni 266126 Bacteria Bacteria 181 2.14e-51   NR WP_416692711.1 266126 g31419 i0 98.9 1.99270072992701 91 1 99.6 0 274 2 54 144 WP_416692711.1 patatin-like phospholipase family protein [Azonexus caeni] diamond 546 181 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Azonexaceae Azonexus Azonexus caeni
405912 405912 PRJNA385073_P_NODE_33501_length_269_cov_2.321429_g33339_i0 PRJNA385073 33501 269 2.321429 6.24464401 Methylorubrum salsuginis 414703 Bacteria Bacteria 149 1.8799999999999994e-42   NR WP_091941880.1 414703 g33339 i0 87.2 0.869888475836431 78 10 87 0 268 35 211 288 WP_091941880.1 dienelactone hydrolase family protein [Methylorubrum salsuginis] diamond 234 149 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum salsuginis
405922 405922 PRJNA385073_P_NODE_33921_length_268_cov_2.051282_g33759_i0 PRJNA385073 33921 268 2.051282 5.49743576 Rhizobiaceae bacterium 1913961 Bacteria Bacteria 169 2.14e-50   NR MBL8581363.1 1913961 g33759 i0 89.9 0.996268656716418 89 9 99.6 0 268 2 101 189 MBL8581363.1 restriction endonuclease [Rhizobiaceae bacterium] diamond 267 169 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae   Rhizobiaceae bacterium
405999 405999 PRJNA385073_P_NODE_37581_length_259_cov_2.543011_g37419_i0 PRJNA385073 37581 259 2.543011 6.58639849 Inquilinus sp. CAU 1745 3140369 Bacteria Bacteria 167 1.07e-46   NR WP_347540496.1 3140369 g37419 i0 94.2 0.996138996138996 86 5 99.6 0 2 259 303 388 WP_347540496.1 arginine--tRNA ligase [Inquilinus sp. CAU 1745] diamond 258 167 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Rhodospirillaceae Inquilinus Inquilinus sp. CAU 1745
406036 406036 PRJNA385073_P_NODE_39441_length_255_cov_1.571429_g39279_i0 PRJNA385073 39441 255 1.571429 4.00714395 Pseudomonas 286 Bacteria Bacteria 160 1.37e-43   NR WP_128672650.1 286 g39279 i0 97.6 1 85 2 100 0 255 1 575 659 WP_128672650.1 MULTISPECIES: hypothetical protein [Pseudomonas] diamond 255 160 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales Pseudomonadaceae Pseudomonas  
406047 406047 PRJNA385073_P_NODE_40081_length_253_cov_2.561111_g39919_i0 PRJNA385073 40081 253 2.561111 6.47961083 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 169 2.51e-48   NR WP_211961820.1 199684 g39919 i0 98.8 0.99604743083004 84 1 99.6 0 2 253 285 368 WP_211961820.1 MutS-related protein [uncultured Bradyrhizobium sp.] diamond 252 169 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
406126 406126 PRJNA385073_P_NODE_43841_length_250_cov_0.870056_g43679_i0 PRJNA385073 43841 250 0.870056 2.17514 Sphingomonas sp. 28214 Bacteria Bacteria 169 4.55e-50   NR WP_374135784.1 28214 g43679 i0 100 1.992 83 0 99.6 0 1 249 117 199 WP_374135784.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase FolD [Sphingomonas sp.] diamond 498 169 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
406362 406362 PRJNA385073_P_NODE_54901_length_243_cov_0.905882_g54739_i0 PRJNA385073 54901 243 0.905882 2.20129326 Pusillimonas sp. T7-7 1007105 Bacteria Bacteria 145 5.93e-39   NR WP_013743523.1 1007105 g54739 i0 85 0.987654320987654 80 12 98.8 0 3 242 198 277 WP_013743523.1 IS66 family transposase [Pusillimonas sp. T7-7] diamond 240 145 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Pusillimonas Pusillimonas sp. T7-7
406390 406390 PRJNA385073_P_NODE_56261_length_242_cov_1.810651_g56099_i0 PRJNA385073 56261 242 1.810651 4.38177542 Azonexus sp. 1872668 Bacteria Bacteria 159 4.539999999999999e-46   NR MBP8170194.1 1872668 g56099 i0 98.7 0.929752066115702 75 1 93 0 18 242 1 75 MBP8170194.1 MerR family transcriptional regulator [Azonexus sp.] diamond 225 159 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Azonexaceae Azonexus Azonexus sp.
406422 406422 PRJNA385073_P_NODE_57761_length_241_cov_3.654762_g57599_i0 PRJNA385073 57761 241 3.654762 8.80797642 Pinisolibacter aquiterrae 2815579 Bacteria Bacteria 132 5.219999999999999e-34   NR WP_217927250.1 2815579 g57599 i0 78.2 1.96680497925311 78 17 97.1 0 7 240 256 333 WP_217927250.1 bifunctional protein-serine/threonine kinase/phosphatase [Pinisolibacter aquiterrae] diamond 474 132 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Ancalomicrobiaceae Pinisolibacter Pinisolibacter aquiterrae
406480 406480 PRJNA385073_P_NODE_60321_length_237_cov_2.628049_g60159_i0 PRJNA385073 60321 237 2.628049 6.22847613 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 155 4.9199999999999985e-43   NR WP_211969767.1 2631580 g60159 i0 94.9 0.987341772151899 78 4 98.7 0 3 236 287 364 WP_211969767.1 MULTISPECIES: methyltransferase regulatory domain-containing protein [unclassified Bradyrhizobium] diamond 234 155 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
406524 406524 PRJNA385073_P_NODE_62261_length_228_cov_3.716129_g62099_i0 PRJNA385073 62261 228 3.716129 8.47277412 Phenylobacterium zucineum 284016 Bacteria Bacteria 129 5.06e-35   NR PZQ53851.1 284016 g62099 i0 88 0.986842105263158 75 9 98.7 0 227 3 138 212 PZQ53851.1 MAG: molybdate ABC transporter substrate-binding protein [Phenylobacterium zucineum] diamond 225 129 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Phenylobacterium Phenylobacterium zucineum
406554 406554 PRJNA385073_P_NODE_63781_length_215_cov_4.697183_g63619_i0 PRJNA385073 63781 215 4.697183 10.09894345 Parvibaculum sp. 2024848 Bacteria Bacteria 78.6 3.09e-17   NR MDO8421124.1 2024848 g63619 i0 59.7 0.934883720930233 67 25 93.5 1 207 7 6 70 MDO8421124.1 hypothetical protein [Parvibaculum sp.] diamond 201 78.6 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Parvibaculaceae Parvibaculum Parvibaculum sp.
406555 406555 PRJNA385073_P_NODE_63801_length_215_cov_4.140845_g63639_i0 PRJNA385073 63801 215 4.140845 8.90281675 Methylorubrum populi 223967 Bacteria Bacteria 113 1.04e-29   NR WP_141949706.1 223967 g63639 i0 82.1 0.934883720930233 67 12 93.5 0 202 2 2 68 WP_141949706.1 GcrA family cell cycle regulator [Methylorubrum populi] diamond 201 113 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum populi
406562 406562 PRJNA385073_P_NODE_64061_length_211_cov_15.536232_g63899_i0 PRJNA385073 64061 211 15.536232 32.78144952 Methylorubrum rhodinum 29428 Bacteria Bacteria 91.3 1.58e-19   NR WP_376770402.1 29428 g63899 i0 79.4 0.895734597156398 63 8 89.6 2 190 2 1 58 WP_376770402.1 AMP-binding protein [Methylorubrum rhodinum] diamond 189 91.3 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
406605 406605 PRJNA385073_P_NODE_65681_length_196_cov_4.325203_g65519_i0 PRJNA385073 65681 196 4.325203 8.47739788 Pseudomonadota bacterium 1977087 Bacteria Bacteria 147 1.9799999999999994e-42   NR MEY4124656.1 1977087 g65519 i0 100 4.97448979591837 65 0 99.5 0 196 2 85 149 MEY4124656.1 Salicylate 5-hydroxylase, large oxygenase component [Pseudomonadota bacterium] diamond 975 147 1 Bacteria   Pseudomonadati Pseudomonadota         Pseudomonadota bacterium
406614 406614 PRJNA385073_P_NODE_6881_length_472_cov_5.939850_g6721_i0 PRJNA385073 6881 472 5.93985 28.036092 Methylorubrum subtropicum 3138812 Bacteria Bacteria 227 1.11e-71   NR WP_342153168.1 3138812 g6721 i0 82.1 1.91949152542373 151 25 95.3 2 463 14 147 296 WP_342153168.1 hypothetical protein [Methylorubrum subtropicum] diamond 906 227 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum subtropicum
1075982 1075982 PRJNA385073_P_NODE_18321_length_329_cov_0.902344_g18159_i0 PRJNA385073 18321 329 0.902344 2.96871176 Methylorubrum suomiense 144191 Bacteria Bacteria 57.4 4.63e-7   NR GJE77470.1 144191 g18159 i0 55 0.729483282674772 80 32 72 3 310 74 173 249 GJE77470.1 hypothetical protein BGCPKDLD_4075 [Methylorubrum suomiense] diamond 240 57.4 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum suomiense
1076286 1076286 PRJNA385073_P_NODE_43621_length_250_cov_0.870056_g43459_i0 PRJNA385073 43621 250 0.870056 2.17514 Comamonas sp. 34028 Bacteria Bacteria 150 6.79e-42   NR MBV2163694.1 34028 g43459 i0 88 0.996 83 10 99.6 0 249 1 238 320 MBV2163694.1 porin [Comamonas sp.] diamond 249 150 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Comamonadaceae Comamonas Comamonas sp.
1076309 1076309 PRJNA385073_P_NODE_46321_length_248_cov_0.880000_g46159_i0 PRJNA385073 46321 248 0.88 2.1824 Pelomonas aquatica 431058 Bacteria Bacteria 98.2 1.2699999999999999e-23   NR WP_268146247.1 431058 g46159 i0 100 0.556451612903226 46 0 55.6 0 2 139 133 178 WP_268146247.1 cytochrome b [Pelomonas aquatica] diamond 138 98.2 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
1076443 1076443 PRJNA385073_P_NODE_62241_length_228_cov_4.154839_g62079_i0 PRJNA385073 62241 228 4.154839 9.47303292 Tepidimonas ignava 114249 Bacteria Bacteria 143 2.9999999999999998e-40   NR WP_132961559.1 114249 g62079 i0 97.3 0.986842105263158 75 2 98.7 0 2 226 6 80 WP_132961559.1 TrmH family RNA methyltransferase [Tepidimonas ignava] diamond 225 143 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Tepidimonas Tepidimonas ignava
1680467 1680467 PRJNA385073_P_NODE_20922_length_313_cov_7.500000_g20760_i0 PRJNA385073 20922 313 7.5 23.475 uncultured Bradyrhizobium sp. 199684 Bacteria Bacteria 226 4.13e-72   NR WP_298277577.1 199684 g20760 i0 100 0.987220447284345 103 0 98.7 0 311 3 125 227 WP_298277577.1 DUF7007 domain-containing protein [uncultured Bradyrhizobium sp.] diamond 309 226 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium uncultured Bradyrhizobium sp.
1680478 1680478 PRJNA385073_P_NODE_21342_length_311_cov_2.588235_g21180_i0 PRJNA385073 21342 311 2.588235 8.04941085 Bradyrhizobium viridifuturi 1654716 Bacteria Bacteria 203 1.77e-60   NR WP_050629283.1 1654716 g21180 i0 96.1 0.993569131832797 103 4 99.4 0 2 310 381 483 WP_050629283.1 class I adenylate-forming enzyme family protein [Bradyrhizobium viridifuturi] diamond 309 203 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium viridifuturi
1680595 1680595 PRJNA385073_P_NODE_26002_length_290_cov_3.682028_g25840_i0 PRJNA385073 26002 290 3.682028 10.6778812 Bradyrhizobium 374 Bacteria Bacteria 191 6.74e-58   NR WP_198961131.1 374 g25840 i0 96.9 0.993103448275862 96 3 99.3 0 3 290 86 181 WP_198961131.1 MULTISPECIES: amidohydrolase family protein [Bradyrhizobium] diamond 288 191 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
1680755 1680755 PRJNA385073_P_NODE_33142_length_270_cov_2.131980_g32980_i0 PRJNA385073 33142 270 2.13198 5.756346 Pseudomonadota 1224 Bacteria Bacteria 177 5.45e-51   NR MCC7183171.1 1898103 g32980 i0 100 1.97777777777778 89 0 98.9 0 268 2 67 155 MCC7183171.1 ShlB/FhaC/HecB family hemolysin secretion/activation protein [Rhodocyclaceae bacterium] diamond 534 177 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Rhodocyclaceae   Rhodocyclaceae bacterium
1680901 1680901 PRJNA385073_P_NODE_40462_length_252_cov_5.094972_g40300_i0 PRJNA385073 40462 252 5.094972 12.83932944 Tardiphaga sp. 1926292 Bacteria Bacteria 132 3.3300000000000003e-36   NR MDB5567373.1 1926292 g40300 i0 72 1.95238095238095 82 23 97.6 0 5 250 19 100 MDB5567373.1 hypothetical protein [Tardiphaga sp.] diamond 492 132 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Tardiphaga Tardiphaga sp.
1680904 1680904 PRJNA385073_P_NODE_40542_length_252_cov_2.581006_g40380_i0 PRJNA385073 40542 252 2.581006 6.50413512 Nitratireductor thuwali 2267699 Bacteria Bacteria 165 1.46e-47   NR WP_338532319.1 2267699 g40380 i0 95.2 1 84 4 100 0 1 252 146 229 WP_338532319.1 thiolase [Nitratireductor thuwali] diamond 252 165 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Nitratireductor Nitratireductor thuwali
1680983 1680983 PRJNA385073_P_NODE_44322_length_249_cov_2.375000_g44160_i0 PRJNA385073 44322 249 2.375 5.91375 Roseomonas 125216 Bacteria Bacteria 117 1.04e-28   NR WP_216877425.1 125216 g44160 i0 69.1 0.975903614457831 81 25 97.6 0 248 6 388 468 WP_216877425.1 MULTISPECIES: AMP-binding protein [Roseomonas] diamond 243 117 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Acetobacterales Roseomonadaceae Roseomonas  
1681038 1681038 PRJNA385073_P_NODE_47102_length_248_cov_0.880000_g46940_i0 PRJNA385073 47102 248 0.88 2.1824 Dongiaceae bacterium 3069224 Bacteria Bacteria 135 2.27e-36   NR HWA47751.1 3069224 g46940 i0 75.6 0.991935483870968 82 20 99.2 0 246 1 145 226 HWA47751.1 SAM-dependent methyltransferase [Dongiaceae bacterium] diamond 246 135 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Rhodospirillales Dongiaceae   Dongiaceae bacterium
1681051 1681051 PRJNA385073_P_NODE_47542_length_247_cov_3.086207_g47380_i0 PRJNA385073 47542 247 3.086207 7.62293129 Pelomonas aquatica 431058 Bacteria Bacteria 132 6.73e-35   NR WP_268154115.1 431058 g47380 i0 100 0.765182186234818 63 0 76.5 0 59 247 1 63 WP_268154115.1 kynureninase [Pelomonas aquatica] diamond 189 132 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
1681052 1681052 PRJNA385073_P_NODE_47562_length_247_cov_2.655172_g47400_i0 PRJNA385073 47562 247 2.655172 6.55827484 Salinisphaeraceae bacterium 2026789 Bacteria Bacteria 110 4.26e-26   NR HLQ85529.1 2026789 g47400 i0 69.5 0.995951417004049 82 25 99.6 0 1 246 510 591 HLQ85529.1 DNA mismatch repair protein MutS [Salinisphaeraceae bacterium] diamond 246 110 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Salinisphaerales Salinisphaeraceae   Salinisphaeraceae bacterium
1681058 1681058 PRJNA385073_P_NODE_47742_length_247_cov_1.741379_g47580_i0 PRJNA385073 47742 247 1.741379 4.30120613 Paraperlucidibaca baekdonensis 748120 Bacteria Bacteria 167 6.32e-49   NR WP_116208435.1 748120 g47580 i0 89 0.995951417004049 82 9 99.6 0 2 247 173 254 WP_116208435.1 phosphotransferase family protein [Paraperlucidibaca baekdonensis] diamond 246 167 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Moraxellales Moraxellaceae Paraperlucidibaca Paraperlucidibaca baekdonensis
1681108 1681108 PRJNA385073_P_NODE_50302_length_246_cov_0.890173_g50140_i0 PRJNA385073 50302 246 0.890173 2.18982558 Pseudomonadales bacterium 1891229 Bacteria Bacteria 130 4.54e-34   NR NRB39968.1 1891229 g50140 i0 84 1.98780487804878 81 13 98.8 0 1 243 10 90 NRB39968.1 aspartate kinase [Pseudomonadales bacterium] diamond 489 130 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Pseudomonadales     Pseudomonadales bacterium
1681156 1681156 PRJNA385073_P_NODE_52842_length_244_cov_1.783626_g52680_i0 PRJNA385073 52842 244 1.783626 4.35204744 Aquabacterium sp. OR-4 2978127 Bacteria Bacteria 121 6.53e-30   NR WP_260787493.1 2978127 g52680 i0 79 0.995901639344262 81 17 99.6 0 243 1 316 396 WP_260787493.1 putative bifunctional diguanylate cyclase/phosphodiesterase [Aquabacterium sp. OR-4] diamond 243 121 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium sp. OR-4
1681161 1681161 PRJNA385073_P_NODE_5302_length_523_cov_3.073333_g5143_i0 PRJNA385073 5302 523 3.073333 16.07353159 Bradyrhizobium sp. 376 Bacteria Bacteria 261 3.44e-83   NR HLI98484.1 376 g5143 i0 86 6.22370936902486 150 21 86 0 66 515 1 150 HLI98484.1 CDF family Co(II)/Ni(II) efflux transporter DmeF [Bradyrhizobium sp.] diamond 3255 261 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
1681202 1681202 PRJNA385073_P_NODE_55682_length_243_cov_0.905882_g55520_i0 PRJNA385073 55682 243 0.905882 2.20129326 Klebsiella oxytoca 571 Bacteria Bacteria 96.3 2.23e-22   NR VDY49933.1 571 g55520 i0 67.9 1 81 21 98.8 2 3 242 86 162 VDY49933.1 50S ribosomal protein L14 [Klebsiella oxytoca] diamond 243 96.3 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Enterobacterales Enterobacteriaceae Klebsiella Klebsiella oxytoca
1681219 1681219 PRJNA385073_P_NODE_56702_length_242_cov_0.911243_g56540_i0 PRJNA385073 56702 242 0.911243 2.20520806 Tepidimonas 114248 Bacteria Bacteria 171 1.05e-51   NR WP_246094730.1 247482 g56540 i0 100 1.98347107438017 80 0 99.2 0 1 240 125 204 WP_246094730.1 DDE-type integrase/transposase/recombinase, partial [Tepidimonas aquatica] diamond 480 171 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Tepidimonas Tepidimonas aquatica
1681220 1681220 PRJNA385073_P_NODE_56802_length_242_cov_0.911243_g56640_i0 PRJNA385073 56802 242 0.911243 2.20520806 Luteimonas sp. 1873125 Bacteria Bacteria 98.6 8.61e-23   NR MBP6798942.1 1873125 g56640 i0 80 0.743801652892562 60 12 74.4 0 242 63 230 289 MBP6798942.1 exodeoxyribonuclease V subunit gamma [Luteimonas sp.] diamond 180 98.6 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Lysobacteraceae Luteimonas Luteimonas sp.
1681248 1681248 PRJNA385073_P_NODE_58022_length_241_cov_1.785714_g57860_i0 PRJNA385073 58022 241 1.785714 4.30357074 Hyphomicrobiales 356 Bacteria Bacteria 156 4.659999999999998e-42   NR WP_288971642.1 233795 g57860 i0 100 1.99170124481328 80 0 99.6 0 1 240 29 108 WP_288971642.1 error-prone DNA polymerase [uncultured Mesorhizobium sp.] diamond 480 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium uncultured Mesorhizobium sp.
1681252 1681252 PRJNA385073_P_NODE_58262_length_241_cov_0.916667_g58100_i0 PRJNA385073 58262 241 0.916667 2.20916747 Novosphingobium sp. 1874826 Bacteria Bacteria 138 2.39e-39   NR MET0589214.1 1874826 g58100 i0 82.5 0.995850622406639 80 14 99.6 0 2 241 19 98 MET0589214.1 DsbE family thiol:disulfide interchange protein [Novosphingobium sp.] diamond 240 138 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Novosphingobium Novosphingobium sp.
1681378 1681378 PRJNA385073_P_NODE_63182_length_223_cov_4.413333_g63020_i0 PRJNA385073 63182 223 4.413333 9.84173259 Methylobacterium 407 Bacteria Bacteria 160 8.219999999999999e-47   NR WP_279892690.1 407 g63020 i0 100 2.98654708520179 74 0 99.6 0 222 1 155 228 WP_279892690.1 MULTISPECIES: IS481 family transposase [Methylobacterium] diamond 666 160 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
1681417 1681417 PRJNA385073_P_NODE_64702_length_205_cov_4.212121_g64540_i0 PRJNA385073 64702 205 4.212121 8.63484805 Pelomonas sp. KK5 1855730 Bacteria Bacteria 89.7 5.27e-19   NR WP_198937767.1 1855730 g64540 i0 86.2 0.848780487804878 58 4 79 1 162 1 1 58 WP_198937767.1 DUF1329 domain-containing protein [Pelomonas sp. KK5] diamond 174 89.7 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas sp. KK5
1681427 1681427 PRJNA385073_P_NODE_65062_length_201_cov_5.703125_g64900_i0 PRJNA385073 65062 201 5.703125 11.46328125 Bacteria 2 Bacteria Bacteria 122 3.3199999999999996e-31   NR WP_156854937.1 650 g64900 i0 90.9 8.86567164179104 66 6 98.5 0 200 3 26 91 WP_156854937.1 reverse transcriptase domain-containing protein [Aeromonas jandaei] diamond 1782 123 0.991869918699187 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Aeromonadales Aeromonadaceae Aeromonas Aeromonas jandaei
2351623 2351623 PRJNA385073_P_NODE_38522_length_257_cov_1.673913_g38360_i0 PRJNA385073 38522 257 1.673913 4.30195641 Croceicoccus mobilis 1703339 Bacteria Bacteria 75.5 1.32e-13   NR WP_172808099.1 1703339 g38360 i0 47.2 1.03891050583658 89 39 98.1 3 5 256 424 509 WP_172808099.1 TonB-dependent receptor [Croceicoccus mobilis] diamond 267 75.5 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Croceicoccus Croceicoccus mobilis
2351693 2351693 PRJNA385073_P_NODE_46042_length_248_cov_1.760000_g45880_i0 PRJNA385073 46042 248 1.76 4.3648 Marinomonas 28253 Bacteria Bacteria 161 1.5599999999999998e-45   NR WP_133002992.1 28253 g45880 i0 100 0.991935483870968 82 0 99.2 0 2 247 5 86 WP_133002992.1 MULTISPECIES: anti-phage deoxyguanosine triphosphatase [Marinomonas] diamond 246 161 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Oceanospirillales Oceanospirillaceae Marinomonas  
2351865 2351865 PRJNA385073_P_NODE_6782_length_475_cov_2.858209_g6622_i0 PRJNA385073 6782 475 2.858209 13.57649275 Bradyrhizobium prioriisuperbiae 2854389 Bacteria Bacteria 162 1.08e-42   NR WP_315832841.1 2854389 g6622 i0 78.9 0.808421052631579 128 27 80.8 0 67 450 604 731 WP_315832841.1 autotransporter-associated beta strand repeat-containing protein [Bradyrhizobium prioriisuperbiae] diamond 384 162 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium prioriisuperbiae
2956183 2956183 PRJNA385073_P_NODE_14363_length_357_cov_2.260563_g14202_i0 PRJNA385073 14363 357 2.260563 8.07020991 Hyphomicrobiales 356 Bacteria Bacteria 87.4 3.1e-18   NR WP_238274143.1 407 g14202 i0 46.1 1.45378151260504 89 48 74.8 0 60 326 91 179 WP_238274143.1 MULTISPECIES: class I SAM-dependent methyltransferase [Methylobacterium] diamond 519 88.2 0.99092970521542 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
2956190 2956190 PRJNA385073_P_NODE_14583_length_355_cov_3.046099_g14422_i0 PRJNA385073 14583 355 3.046099 10.81365145 Shinella sp. CPCC 1 1870904 Bacteria Bacteria 110 5.21e-26   NR WP_257951724.1 2932265 g14422 i0 77.4 1.02253521126761 62 14 52.4 0 2 187 329 390 WP_257951724.1 M20 aminoacylase family protein [Shinella sp. CPCC 101442] diamond 363 110 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Rhizobiaceae Shinella Shinella sp. CPCC 101442
2956191 2956191 PRJNA385073_P_NODE_14603_length_355_cov_2.294326_g14442_i0 PRJNA385073 14603 355 2.294326 8.1448573 Bradyrhizobium sp. 376 Bacteria Bacteria 204 8.350000000000001e-64   NR WP_298361835.1 376 g14442 i0 98.1 0.904225352112676 107 2 90.4 0 323 3 1 107 WP_298361835.1 SDR family NAD(P)-dependent oxidoreductase [Bradyrhizobium sp.] diamond 321 204 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
2956245 2956245 PRJNA385073_P_NODE_16843_length_338_cov_3.520755_g16682_i0 PRJNA385073 16843 338 3.520755 11.9001519 Bradyrhizobium 374 Bacteria Bacteria 221 5.979999999999999e-66   NR WP_188104722.1 1729892 g16682 i0 99.1 1.98816568047337 112 1 99.4 0 3 338 56 167 WP_188104722.1 type IV secretory system conjugative DNA transfer family protein [Bradyrhizobium campsiandrae] diamond 672 221 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium campsiandrae
2956313 2956313 PRJNA385073_P_NODE_20383_length_316_cov_2.839506_g20221_i0 PRJNA385073 20383 316 2.839506 8.97283896 Methylobacterium sp. B4 1938755 Bacteria Bacteria 129 2.33e-32   NR WP_110353538.1 1938755 g20221 i0 73.1 0.987341772151899 104 28 98.7 0 314 3 459 562 WP_110353538.1 methyl-accepting chemotaxis protein [Methylobacterium sp. B4] diamond 312 129 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. B4
2956410 2956410 PRJNA385073_P_NODE_24763_length_295_cov_4.229730_g24601_i0 PRJNA385073 24763 295 4.22973 12.4777035 Pelomonas aquatica 431058 Bacteria Bacteria 186 9.999999999999999e-55   NR WP_268153787.1 431058 g24601 i0 98 1.99322033898305 98 1 98.6 1 293 3 325 422 WP_268153787.1 amidohydrolase family protein [Pelomonas aquatica] diamond 588 186 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
2956483 2956483 PRJNA385073_P_NODE_28083_length_284_cov_2.090047_g27921_i0 PRJNA385073 28083 284 2.090047 5.93573348 Pelagerythrobacter 2800685 Bacteria Bacteria 167 3.88e-50   NR WP_129524771.1 2268576 g27921 i0 87.6 1.92253521126761 89 9 93 2 1 264 90 177 WP_129524771.1 hypothetical protein [Pelagerythrobacter rhizovicinus] diamond 546 168 0.994047619047619 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Erythrobacteraceae Pelagerythrobacter Pelagerythrobacter rhizovicinus
2956491 2956491 PRJNA385073_P_NODE_28403_length_283_cov_2.323810_g28241_i0 PRJNA385073 28403 283 2.32381 6.5763823 Castellaniella 359336 Bacteria Bacteria 97.1 1.63e-21   NR WP_066453638.1 266123 g28241 i0 70.1 7.6113074204947 67 20 71 0 201 1 11 77 WP_066453638.1 tRNA 2-selenouridine(34) synthase MnmH [Castellaniella caeni] diamond 2154 97.4 0.996919917864476 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Alcaligenaceae Castellaniella Castellaniella caeni
2956502 2956502 PRJNA385073_P_NODE_28763_length_282_cov_2.186603_g28601_i0 PRJNA385073 28763 282 2.186603 6.16622046 Methylobacterium sp. Leaf118 2876562 Bacteria Bacteria 155 1.34e-41   NR WP_232630031.1 2876562 g28601 i0 90.3 0.98936170212766 93 9 98.9 0 280 2 76 168 WP_232630031.1 ABC transporter permease [Methylobacterium sp. Leaf118] diamond 279 155 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf118
2956503 2956503 PRJNA385073_P_NODE_28823_length_282_cov_1.765550_g28661_i0 PRJNA385073 28823 282 1.76555 4.978851 Mizugakiibacter sp. 1972610 Bacteria Bacteria 122 4.82e-30   NR HEX7112725.1 1972610 g28661 i0 66.7 0.98936170212766 93 31 98.9 0 1 279 276 368 HEX7112725.1 DUF5906 domain-containing protein [Mizugakiibacter sp.] diamond 279 122 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Rhodanobacteraceae Mizugakiibacter Mizugakiibacter sp.
2956640 2956640 PRJNA385073_P_NODE_35463_length_264_cov_2.130890_g35301_i0 PRJNA385073 35463 264 2.13089 5.6255496 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 145 2.58e-40   NR WP_056241969.1 1736382 g35301 i0 83.9 2.96590909090909 87 14 98.9 0 263 3 67 153 WP_056241969.1 sensor histidine kinase [Methylobacterium sp. Leaf456] diamond 783 145 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
2956674 2956674 PRJNA385073_P_NODE_36823_length_261_cov_1.638298_g36661_i0 PRJNA385073 36823 261 1.638298 4.27595778 Sphingomonadales 204457 Bacteria Bacteria 182 4.79e-52   NR WP_374136545.1 28214 g36661 i0 100 2 87 0 100 0 261 1 556 642 WP_374136545.1 alpha/beta hydrolase family protein [Sphingomonas sp.] diamond 522 182 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
2956800 2956800 PRJNA385073_P_NODE_42563_length_250_cov_3.610169_g42401_i0 PRJNA385073 42563 250 3.610169 9.0254225 Methylobacteriaceae 119045 Bacteria Bacteria 104 1e-24   NR WP_253397065.1 408 g42401 i0 90 1.2 50 5 60 0 4 153 269 318 WP_253397065.1 IS1595 family transposase [Methylorubrum extorquens] diamond 300 105 0.990476190476191 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum extorquens
2957027 2957027 PRJNA385073_P_NODE_54303_length_243_cov_6.341176_g54141_i0 PRJNA385073 54303 243 6.341176 15.40905768 Bradyrhizobium sp. Pha-3 208375 Bacteria Bacteria 132 2.46e-35   NR WP_375787191.1 208375 g54141 i0 91.4 1.66666666666667 70 6 86.4 0 211 2 37 106 WP_375787191.1 DNA polymerase beta superfamily protein [Bradyrhizobium sp. Pha-3] diamond 405 132 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Pha-3
2957037 2957037 PRJNA385073_P_NODE_5483_length_517_cov_2.745495_g5324_i0 PRJNA385073 5483 517 2.745495 14.19420915 Bacteria 2 Bacteria Bacteria 243 2.77e-77   NR WP_243980198.1 2836575 g5324 i0 99.2 1.49709864603482 129 1 74.9 0 56 442 1 129 WP_243980198.1 LysR family transcriptional regulator [Methylobacterium sp. E-045] diamond 774 243 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. E-045
2957145 2957145 PRJNA385073_P_NODE_59703_length_240_cov_2.305389_g59541_i0 PRJNA385073 59703 240 2.305389 5.5329336 Candidatus Raskinella chloraquaticus 1951219 Bacteria Bacteria 161 5.8e-45   NR WP_376802205.1 1951219 g59541 i0 100 1 80 0 100 0 1 240 423 502 WP_376802205.1 malate synthase A [Candidatus Raskinella chloraquaticus] diamond 240 161 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phreatobacteraceae Candidatus Raskinella Candidatus Raskinella chloraquaticus
2957154 2957154 PRJNA385073_P_NODE_60183_length_237_cov_6.091463_g60021_i0 PRJNA385073 60183 237 6.091463 14.43676731 Pelomonas aquatica 431058 Bacteria Bacteria 161 6.09e-47   NR WP_268148093.1 431058 g60021 i0 100 0.987341772151899 78 0 98.7 0 236 3 231 308 WP_268148093.1 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA [Pelomonas aquatica] diamond 234 161 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
2957155 2957155 PRJNA385073_P_NODE_60203_length_237_cov_4.439024_g60041_i0 PRJNA385073 60203 237 4.439024 10.52048688 Bradyrhizobium 374 Bacteria Bacteria 99 5.489999999999999e-24   NR WP_152535558.1 196490 g60041 i0 85.9 1.9746835443038 78 11 98.7 0 4 237 48 125 WP_152535558.1 hypothetical protein [Bradyrhizobium sp. Ai1a-2] diamond 468 100 0.99 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp. Ai1a-2
2957170 2957170 PRJNA385073_P_NODE_60703_length_235_cov_3.123457_g60541_i0 PRJNA385073 60703 235 3.123457 7.34012395 Bacteria 2 Bacteria Bacteria 130 6.16e-33   NR MEA3181860.1 1913989 g60541 i0 89.6 2.94893617021277 77 8 98.3 0 3 233 818 894 MEA3181860.1 hypothetical protein [Gammaproteobacteria bacterium] diamond 693 130 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria       Gammaproteobacteria bacterium
2957203 2957203 PRJNA385073_P_NODE_6223_length_492_cov_3.348449_g6063_i0 PRJNA385073 6223 492 3.348449 16.47436908 Bradyrhizobium guangzhouense 1325095 Bacteria Bacteria 312 6.02e-105   NR WP_128962325.1 1325095 g6063 i0 89.5 1.97560975609756 162 17 98.8 0 486 1 11 172 WP_128962325.1 dioxygenase [Bradyrhizobium guangzhouense] diamond 972 312 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium guangzhouense
2957237 2957237 PRJNA385073_P_NODE_63463_length_219_cov_5.554795_g63301_i0 PRJNA385073 63463 219 5.554795 12.16500105 Sandaracinobacteroides hominis 2780086 Bacteria Bacteria 144 2.42e-39   NR WP_199555842.1 2780086 g63301 i0 100 0.986301369863014 72 0 98.6 0 218 3 135 206 WP_199555842.1 aminomethyl-transferring glycine dehydrogenase subunit GcvPA [Sandaracinobacteroides hominis] diamond 216 144 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingosinicellaceae Sandaracinobacteroides Sandaracinobacteroides hominis
2957259 2957259 PRJNA385073_P_NODE_64583_length_206_cov_4.541353_g64421_i0 PRJNA385073 64583 206 4.541353 9.35518718 Bacteria 2 Bacteria Bacteria 129 1.87e-36   NR MBY0271537.1 1891238 g64421 i0 95.6 3.96116504854369 68 3 99 0 2 205 24 91 MBY0271537.1 PTS fructose transporter subunit IIA [Burkholderiales bacterium] diamond 816 129 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales     Burkholderiales bacterium
2957288 2957288 PRJNA385073_P_NODE_6763_length_476_cov_1.667494_g6603_i0 PRJNA385073 6763 476 1.667494 7.93727144 unclassified Methylobacterium 2615210 Bacteria Bacteria 127 1.51e-33   NR WP_012332704.1 2615210 g6603 i0 55.7 3.07563025210084 122 54 76.9 0 57 422 91 212 WP_012332704.1 MULTISPECIES: BON domain-containing protein [unclassified Methylobacterium] diamond 1464 127 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium  
3626818 3626818 PRJNA385073_P_NODE_25243_length_293_cov_3.472727_g25081_i0 PRJNA385073 25243 293 3.472727 10.17509011 Pseudothauera lacus 2136175 Bacteria Bacteria 210 4.31e-66   NR WP_181358969.1 2136175 g25081 i0 100 0.993174061433447 97 0 99.3 0 2 292 190 286 WP_181358969.1 ribosome small subunit-dependent GTPase A [Pseudothauera lacus] diamond 291 210 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Zoogloeaceae Pseudothauera Pseudothauera lacus
3626823 3626823 PRJNA385073_P_NODE_25483_length_292_cov_2.922374_g25321_i0 PRJNA385073 25483 292 2.922374 8.53333208 unclassified Bradyrhizobium 2631580 Bacteria Bacteria 134 2.7399999999999996e-35   NR WP_027526961.1 2631580 g25321 i0 100 1.31506849315068 64 0 65.8 0 291 100 324 387 WP_027526961.1 MULTISPECIES: muconate/chloromuconate family cycloisomerase [unclassified Bradyrhizobium] diamond 384 134 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium  
3626825 3626825 PRJNA385073_P_NODE_25543_length_292_cov_2.105023_g25381_i0 PRJNA385073 25543 292 2.105023 6.14666716 Pelomonas aquatica 431058 Bacteria Bacteria 194 4.69e-60   NR WP_268146696.1 431058 g25381 i0 100 0.996575342465753 97 0 99.7 0 291 1 141 237 WP_268146696.1 SDR family oxidoreductase [Pelomonas aquatica] diamond 291 194 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales Sphaerotilaceae Roseateles Pelomonas aquatica
3627163 3627163 PRJNA385073_P_NODE_60223_length_237_cov_3.798780_g60061_i0 PRJNA385073 60223 237 3.79878 9.0031086 Aquabacterium sp. G14 3130164 Bacteria Bacteria 139 5.139999999999999e-37   NR WP_339584236.1 3130164 g60061 i0 98.7 0.987341772151899 78 1 98.7 0 2 235 168 245 WP_339584236.1 YifB family Mg chelatase-like AAA ATPase [Aquabacterium sp. G14] diamond 234 139 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium sp. G14
4232585 4232585 PRJNA385073_P_NODE_13284_length_367_cov_1.646259_g13123_i0 PRJNA385073 13284 367 1.646259 6.04177053 Bradyrhizobium mercantei 1904807 Bacteria Bacteria 157 5.609999999999998e-47   NR WP_245335014.1 1904807 g13123 i0 87.8 0.735694822888283 90 11 73.6 0 367 98 35 124 WP_245335014.1 winged helix-turn-helix transcriptional regulator [Bradyrhizobium mercantei] diamond 270 157 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium mercantei
4232686 4232686 PRJNA385073_P_NODE_17884_length_331_cov_2.306202_g17722_i0 PRJNA385073 17884 331 2.306202 7.63352862 Bradyrhizobium 374 Bacteria Bacteria 220 5.3e-71   NR WP_188104741.1 1729892 g17722 i0 100 1.99395770392749 110 0 99.7 0 1 330 63 172 WP_188104741.1 thermonuclease family protein [Bradyrhizobium campsiandrae] diamond 660 220 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium campsiandrae
4232720 4232720 PRJNA385073_P_NODE_19864_length_319_cov_3.536585_g19702_i0 PRJNA385073 19864 319 3.536585 11.28170615 Bradyrhizobium campsiandrae 1729892 Bacteria Bacteria 213 2.01e-68   NR WP_188104793.1 1729892 g19702 i0 98.1 0.996865203761755 106 2 99.7 0 318 1 72 177 WP_188104793.1 DoxX family protein [Bradyrhizobium campsiandrae] diamond 318 213 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium campsiandrae
4232778 4232778 PRJNA385073_P_NODE_22204_length_308_cov_2.774468_g22042_i0 PRJNA385073 22204 308 2.774468 8.54536144 Bradyrhizobium prioriisuperbiae 2854389 Bacteria Bacteria 115 1.75e-27   NR WP_315832841.1 2854389 g22042 i0 71.4 0.954545454545455 98 28 95.5 0 9 302 2185 2282 WP_315832841.1 autotransporter-associated beta strand repeat-containing protein [Bradyrhizobium prioriisuperbiae] diamond 294 115 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium prioriisuperbiae
4232794 4232794 PRJNA385073_P_NODE_22784_length_305_cov_2.702586_g22622_i0 PRJNA385073 22784 305 2.702586 8.2428873 Pseudomonadota 1224 Bacteria Bacteria 184 1.4999999999999999e-53   NR WP_291730555.1 376 g22622 i0 89.1 1.98688524590164 101 11 99.3 0 305 3 162 262 WP_291730555.1 AAA family ATPase [Bradyrhizobium sp.] diamond 606 184 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
4232819 4232819 PRJNA385073_P_NODE_23904_length_299_cov_2.008850_g23742_i0 PRJNA385073 23904 299 2.00885 6.0064615 Bradyrhizobium sp. 376 Bacteria Bacteria 118 2.45e-30   NR WP_298361881.1 376 g23742 i0 96.8 0.622073578595318 62 2 62.2 0 112 297 1 62 WP_298361881.1 enoyl-CoA hydratase/isomerase family protein [Bradyrhizobium sp.] diamond 186 118 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
4232907 4232907 PRJNA385073_P_NODE_27684_length_285_cov_4.132075_g27522_i0 PRJNA385073 27684 285 4.132075 11.77641375 Mesorhizobium sp. AaZ16 3402289 Bacteria Bacteria 146 1.0899999999999997e-42   NR WP_394889648.1 3402289 g27522 i0 76.3 6.76842105263158 93 22 97.9 0 283 5 47 139 WP_394889648.1 DUF1801 domain-containing protein [Mesorhizobium camelthorni] diamond 1929 146 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Phyllobacteriaceae Mesorhizobium Mesorhizobium sp. AaZ16
4232927 4232927 PRJNA385073_P_NODE_28784_length_282_cov_2.033493_g28622_i0 PRJNA385073 28784 282 2.033493 5.73445026 Aquabacterium sp. UBA2148 1946042 Bacteria Bacteria 166 4.83e-51   NR WP_286742382.1 1946042 g28622 i0 100 1.85106382978723 87 0 92.6 0 20 280 1 87 WP_286742382.1 nitrilase-related carbon-nitrogen hydrolase, partial [Aquabacterium sp. UBA2148] diamond 522 166 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium sp. UBA2148
4232995 4232995 PRJNA385073_P_NODE_31564_length_274_cov_2.736318_g31402_i0 PRJNA385073 31564 274 2.736318 7.49751132 Bradyrhizobium jicamae 280332 Bacteria Bacteria 177 4.22e-50   NR WP_212494760.1 280332 g31402 i0 94.5 0.996350364963504 91 5 99.6 0 2 274 375 465 WP_212494760.1 sigma-54-dependent Fis family transcriptional regulator [Bradyrhizobium jicamae] diamond 273 177 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium jicamae
4233136 4233136 PRJNA385073_P_NODE_37944_length_258_cov_3.302703_g37782_i0 PRJNA385073 37944 258 3.302703 8.52097374 Aquabacterium 92793 Bacteria Bacteria 159 4.98e-45   NR WP_133609811.1 70586 g37782 i0 94.1 1.97674418604651 85 5 98.8 0 257 3 265 349 WP_133609811.1 FIST signal transduction protein [Aquabacterium commune] diamond 510 159 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Burkholderiales   Aquabacterium Aquabacterium commune
4233154 4233154 PRJNA385073_P_NODE_38744_length_256_cov_3.633880_g38582_i0 PRJNA385073 38744 256 3.63388 9.3027328 Methylorubrum rhodinum 29428 Bacteria Bacteria 112 9.98e-27   NR WP_210306386.1 29428 g38582 i0 82.6 0.80859375 69 12 80.9 0 254 48 2412 2480 WP_210306386.1 hypothetical protein [Methylorubrum rhodinum] diamond 207 112 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
4233171 4233171 PRJNA385073_P_NODE_39604_length_254_cov_3.861878_g39442_i0 PRJNA385073 39604 254 3.861878 9.80917012 Methylobacterium sp. Leaf456 1736382 Bacteria Bacteria 110 8.81e-26   NR WP_056242716.1 1736382 g39442 i0 72.6 0.992125984251969 84 23 99.2 0 253 2 2061 2144 WP_056242716.1 non-ribosomal peptide synthetase [Methylobacterium sp. Leaf456] diamond 252 110 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium sp. Leaf456
4233196 4233196 PRJNA385073_P_NODE_40624_length_252_cov_2.055866_g40462_i0 PRJNA385073 40624 252 2.055866 5.18078232 Sphingomonadales 204457 Bacteria Bacteria 167 1.3e-49   NR WP_374135674.1 28214 g40462 i0 100 1.97619047619048 83 0 98.8 0 2 250 154 236 WP_374135674.1 phosphatidate cytidylyltransferase [Sphingomonas sp.] diamond 498 167 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp.
4233201 4233201 PRJNA385073_P_NODE_41004_length_251_cov_2.584270_g40842_i0 PRJNA385073 41004 251 2.58427 6.4865177 Phenylobacterium haematophilum 98513 Bacteria Bacteria 145 2.65e-39   NR WP_183773400.1 98513 g40842 i0 100 0.896414342629482 75 0 89.6 0 3 227 402 476 WP_183773400.1 UdgX family uracil-DNA binding protein [Phenylobacterium haematophilum] diamond 225 145 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Caulobacterales Caulobacteraceae Phenylobacterium Phenylobacterium haematophilum
4233235 4233235 PRJNA385073_P_NODE_42944_length_250_cov_1.305085_g42782_i0 PRJNA385073 42944 250 1.305085 3.2627125 Methylobacterium komagatae 374425 Bacteria Bacteria 63.2 2.72e-10   NR WP_378966096.1 374425 g42782 i0 59.6 0.624 52 19 60 1 168 19 4 55 WP_378966096.1 Bro-N domain-containing protein [Methylobacterium komagatae] diamond 156 63.2 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylobacterium Methylobacterium komagatae
4233414 4233414 PRJNA385073_P_NODE_52684_length_244_cov_2.643275_g52522_i0 PRJNA385073 52684 244 2.643275 6.449591 Methylorubrum rhodinum 29428 Bacteria Bacteria 70.1 9.01e-12   NR WP_183569952.1 29428 g52522 i0 78.3 0.565573770491803 46 10 56.6 0 1 138 589 634 WP_183569952.1 beta strand repeat-containing protein [Methylorubrum rhodinum] diamond 138 70.1 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Methylobacteriaceae Methylorubrum Methylorubrum rhodinum
4233475 4233475 PRJNA385073_P_NODE_56084_length_242_cov_2.940828_g55922_i0 PRJNA385073 56084 242 2.940828 7.11680376 Oleiagrimonas sp. 2010330 Bacteria Bacteria 103 1.3299999999999995e-23   NR HET7266829.1 2010330 g55922 i0 67.1 2.92561983471074 79 26 97.9 0 238 2 40 118 HET7266829.1 autotransporter assembly complex family protein [Oleiagrimonas sp.] diamond 708 103 1 Bacteria   Pseudomonadati Pseudomonadota Gammaproteobacteria Lysobacterales Rhodanobacteraceae Oleiagrimonas Oleiagrimonas sp.
4233574 4233574 PRJNA385073_P_NODE_60524_length_236_cov_2.570552_g60362_i0 PRJNA385073 60524 236 2.570552 6.06650272 Sphingomonas azotifigens 330920 Bacteria Bacteria 156 4.029999999999999e-46   NR WP_369688849.1 330920 g60362 i0 93.6 2.97457627118644 78 5 99.2 0 234 1 96 173 WP_369688849.1 glucose-1-phosphate cytidylyltransferase [Sphingomonas azotifigens] diamond 702 156 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas azotifigens
4233635 4233635 PRJNA385073_P_NODE_63364_length_220_cov_6.068027_g63202_i0 PRJNA385073 63364 220 6.068027 13.3496594 Bradyrhizobium sp. 376 Bacteria Bacteria 149 7.25e-41   NR WP_373852139.1 376 g63202 i0 93.2 0.995454545454545 73 5 99.5 0 2 220 314 386 WP_373852139.1 MutS-related protein [Bradyrhizobium sp.] diamond 219 149 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
4903913 4903913 PRJNA385073_P_NODE_11384_length_388_cov_0.958730_g11223_i0 PRJNA385073 11384 388 0.95873 3.7198724 Bradyrhizobium sp. 376 Bacteria Bacteria 118 2.94e-32   NR WP_211961872.1 376 g11223 i0 92.2 0.494845360824742 64 5 49.5 0 229 38 1 64 WP_211961872.1 hypothetical protein [Bradyrhizobium sp.] diamond 192 118 1 Bacteria   Pseudomonadati Pseudomonadota Alphaproteobacteria Hyphomicrobiales Nitrobacteraceae Bradyrhizobium Bradyrhizobium sp.
4904043 4904043 PRJNA385073_P_NODE_21744_length_310_cov_2.713080_g21582_i0 PRJNA385073 21744 310 2.71308 8.410548 Pseudothauera lacus 2136175 Bacteria Bacteria 91.3 1.6e-19   NR WP_107493748.1 2136175 g21582 i0 100 0.483870967741935 50 0 48.4 0 161 310 58 107 WP_107493748.1 LysR family transcriptional regulator [Pseudothauera lacus] diamond 150 91.3 1 Bacteria   Pseudomonadati Pseudomonadota Betaproteobacteria Rhodocyclales Zoogloeaceae Pseudothauera Pseudothauera lacus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;