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contig_metadata

13 rows where analysis = "diamond", bioproject = "PRJNA385073" and tax_kingdom = "Thermotogati"

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tax_phylum 2

tax_superkingdom 1

tax_kingdom 1

  • Thermotogati · 13 ✖

bioproject 1

  • PRJNA385073 · 13 ✖

analysis 1

  • diamond · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
6783796 6783796 PRJNA385073_P_NODE_41506_length_251_cov_0.865169_g41344_i0 PRJNA385073 41506 251 0.865169 2.17157419 Synergistales 649776 Bacteria Bacteria 165 1.87e-47   NR WP_367337325.1 1872489 g41344 i0 92.8 1.9840637450199201 83 6 99.2 0 249 1 90 172 WP_367337325.1 M20 metallopeptidase family protein [Aminivibrio sp.] diamond 498 165 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminivibrio Aminivibrio sp.
20807751 20807751 PRJNA385073_P_NODE_44837_length_249_cov_0.875000_g44675_i0 PRJNA385073 44837 249 0.875 2.17875 Deinococcales bacterium 2478479 Bacteria Bacteria 142 1.15e-40   NR HLR47222.1 2478479 g44675 i0 81.7 0.987951807228916 82 15 98.8 0 248 3 97 178 HLR47222.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex transferase subunit TsaD [Deinococcales bacterium] diamond 246 142 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales     Deinococcales bacterium
26853933 26853933 PRJNA385073_P_NODE_41681_length_251_cov_0.865169_g41519_i0 PRJNA385073 41681 251 0.865169 2.17157419 Deinococcus antarcticus 1298767 Bacteria Bacteria 169 3.1099999999999995e-48   NR WP_380079479.1 1298767 g41519 i0 100 0.99203187250996006 83 0 99.2 0 250 2 103 185 WP_380079479.1 phytoene desaturase family protein [Deinococcus antarcticus] diamond 249 169 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus antarcticus
27991310 27991310 PRJNA385073_P_NODE_58265_length_241_cov_0.916667_g58103_i0 PRJNA385073 58265 241 0.916667 2.20916747 Synergistaceae bacterium 2053624 Bacteria Bacteria 161 3.6599999999999997e-47   NR MCK9437852.1 2053624 g58103 i0 91.1 1.96680497925311 79 7 98.3 0 3 239 73 151 MCK9437852.1 hypothetical protein [Synergistaceae bacterium] diamond 474 161 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
28243584 28243584 PRJNA385073_P_NODE_50846_length_246_cov_0.861272_g50684_i0 PRJNA385073 50846 246 0.861272 2.11872912 Cloacibacillus evryensis 508460 Bacteria Bacteria 152 1.5499999999999996e-40   NR WP_323398719.1 508460 g50684 i0 91.5 1.98780487804878 82 7 100 0 246 1 928 1009 WP_323398719.1 AAA family ATPase [Cloacibacillus evryensis] diamond 489 152 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae Cloacibacillus Cloacibacillus evryensis
28275231 28275231 PRJNA385073_P_NODE_60406_length_236_cov_5.233129_g60244_i0 PRJNA385073 60406 236 5.233129 12.35018444 Deinococcus ficus 317577 Bacteria Bacteria 71.6 7.26e-13   NR WP_027464402.1 317577 g60244 i0 56 0.953389830508475 75 33 95.3 0 226 2 7 81 WP_027464402.1 hypothetical protein [Deinococcus ficus] diamond 225 71.6 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus
28591184 28591184 PRJNA385073_P_NODE_48127_length_247_cov_0.885057_g47965_i0 PRJNA385073 48127 247 0.885057 2.18609079 Synergistaceae bacterium 2053624 Bacteria Bacteria 82.4 4.17e-16   NR MFA5457936.1 2053624 g47965 i0 97.8 0.558704453441296 46 1 55.9 0 109 246 339 384 MFA5457936.1 hypothetical protein [Synergistaceae bacterium] diamond 138 82.4 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
29460142 29460142 PRJNA385073_P_NODE_48830_length_247_cov_0.885057_g48668_i0 PRJNA385073 48830 247 0.885057 2.18609079 Synergistales 649776 Bacteria Bacteria 105 1.39e-24   NR WP_198470004.1 2529858 g48668 i0 61 1.9919028340081 82 31 99.6 1 2 247 146 226 WP_198470004.1 dihydroorotase [Acetomicrobium sp. S15 = DSM 107314] diamond 492 105 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Acetomicrobiaceae Acetomicrobium Acetomicrobium sp. S15 = DSM 107314
29980438 29980438 PRJNA385073_P_NODE_42131_length_251_cov_0.865169_g41969_i0 PRJNA385073 42131 251 0.865169 2.17157419 Synergistaceae bacterium 2053624 Bacteria Bacteria 167 2.7399999999999997e-47   NR MDY0283456.1 2053624 g41969 i0 100 1.9601593625498 83 0 99.2 0 251 3 65 147 MDY0283456.1 AAA family ATPase [Synergistaceae bacterium] diamond 492 167 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
30738611 30738611 PRJNA385073_P_NODE_37134_length_260_cov_2.497326_g36972_i0 PRJNA385073 37134 260 2.497326 6.4930476 Deinococcus ficus 317577 Bacteria Bacteria 66.6 1.56e-10   NR WP_027463859.1 317577 g36972 i0 51.3 0.923076923076923 80 22 72.7 1 68 256 243 322 WP_027463859.1 sensor domain-containing diguanylate cyclase [Deinococcus ficus] diamond 240 66.6 1 Bacteria   Thermotogati Deinococcota Deinococci Deinococcales Deinococcaceae Deinococcus Deinococcus ficus
32667290 32667290 PRJNA385073_P_NODE_51380_length_245_cov_0.895349_g51218_i0 PRJNA385073 51380 245 0.895349 2.19360505 Aminobacterium mobile 81467 Bacteria Bacteria 147 1.07e-40   NR WP_024822954.1 81467 g51218 i0 100 0.991836734693878 81 0 99.2 0 244 2 253 333 WP_024822954.1 PASTA domain-containing protein [Aminobacterium mobile] diamond 243 147 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminobacterium Aminobacterium mobile
32698762 32698762 PRJNA385073_P_NODE_40540_length_252_cov_2.581006_g40378_i0 PRJNA385073 40540 252 2.581006 6.50413512 Synergistaceae bacterium 2053624 Bacteria Bacteria 160 3.24e-49   NR MDD3690074.1 2053624 g40378 i0 98.8 0.988095238095238 83 1 98.8 0 2 250 4 86 MDD3690074.1 hypothetical protein [Synergistaceae bacterium] diamond 249 160 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Synergistaceae   Synergistaceae bacterium
32730443 32730443 PRJNA385073_P_NODE_43800_length_250_cov_0.870056_g43638_i0 PRJNA385073 43800 250 0.870056 2.17514 Aminivibrio sp. 1872489 Bacteria Bacteria 170 3.07e-49   NR WP_367337626.1 1872489 g43638 i0 100 0.996 83 0 99.6 0 2 250 220 302 WP_367337626.1 glycine/sarcosine/betaine reductase component B subunit [Aminivibrio sp.] diamond 249 170 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Aminivibrio Aminivibrio sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;