RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA385073" and tax_kingdom = "Orthornavirae"

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tax_superkingdom 1

tax_kingdom 1

  • Orthornavirae · 4 ✖

bioproject 1

  • PRJNA385073 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28401652 28401652 PRJNA385073_P_NODE_36926_length_261_cov_1.425532_g36764_i0 PRJNA385073 36926 261 1.425532 3.72063852 Lentinula eaodes hypovirus 2 2992848 Viruses Viruses 161 7.9e-44   NR UZA97544.1 2992848 g36764 i0 98.8 0.977011494252874 85 1 97.7 0 2 256 1565 1649 UZA97544.1 RNA-dependent RNA polymerase [Lentinula eaodes hypovirus 2] diamond 255 161 1 Viruses   Orthornavirae Pisuviricota Duplopiviricetes Durnavirales Hypoviridae Hypovirus Lentinula eaodes hypovirus 2
28811786 28811786 PRJNA385073_P_NODE_54868_length_243_cov_0.905882_g54706_i0 PRJNA385073 54868 243 0.905882 2.20129326 Pseudomonas phage phiYY 1852644 Viruses Viruses 152 5.04e-41   NR YP_009618381.1 1852644 g54706 i0 96.3 0.987654320987654 80 3 98.8 0 241 2 121 200 YP_009618381.1 RNA-dependent RNA polymerase [Pseudomonas phage phiYY] diamond 240 152 1 Viruses   Orthornavirae Duplornaviricota Vidaverviricetes Mindivirales Cystoviridae Gammacystovirus Gammacystovirus phiYY
30043537 30043537 PRJNA385073_P_NODE_64111_length_211_cov_4.572464_g63949_i0 PRJNA385073 64111 211 4.572464 9.64789904 Lentinula edodes deltaflexivirus 2 2778980 Viruses Viruses 131 1.72e-33   NR QOX06049.1 2778980 g63949 i0 95.7 0.981042654028436 69 3 98.1 0 209 3 1023 1091 QOX06049.1 RNA-dependent RNA polymerase, partial [Lentinula edodes deltaflexivirus 2] diamond 207 131 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Tymovirales Deltaflexiviridae   Lentinula edodes deltaflexivirus 2
32320168 32320168 PRJNA385073_P_NODE_21579_length_310_cov_3.552743_g21417_i0 PRJNA385073 21579 310 3.552743 11.0135033 Leviviridae sp. 2027243 Viruses Viruses 70.5 1.25e-11   NR QDH91407.1 2027243 g21417 i0 44.3 0.590322580645161 61 34 59 0 305 123 244 304 QDH91407.1 MAG: hypothetical protein H1Rhizo25885e4861_000003 [Leviviridae sp.] diamond 183 70.5 1 Viruses   Orthornavirae Lenarviricota Leviviricetes Norzivirales Fiersviridae   Leviviridae sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;