RNAquarium Metadata Server
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contig_metadata

4 rows where analysis = "diamond", bioproject = "PRJNA385073" and tax_kingdom = "Bamfordvirae"

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tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

  • Bamfordvirae · 4 ✖

bioproject 1

  • PRJNA385073 · 4 ✖

analysis 1

  • diamond · 4 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27675700 27675700 PRJNA385073_P_NODE_44144_length_250_cov_0.870056_g43982_i0 PRJNA385073 44144 250 0.870056 2.17514 Pimephales minnow adintovirus 2609864 Viruses Viruses 86.3 3.66e-18   NR DAC81396.1 2609864 g43982 i0 54.9 0.984 82 37 98.4 0 247 2 7 88 DAC81396.1 TPA_asm: acintoc2 [Pimephales minnow adintovirus] diamond 246 86.3 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
29538213 29538213 PRJNA385073_P_NODE_30890_length_276_cov_2.753695_g30728_i0 PRJNA385073 30890 276 2.753695 7.6001982 Pimephales minnow adintovirus 2609864 Viruses Viruses 54.7 3.39e-6   NR DAC81393.1 2609864 g30728 i0 54.5 2.30434782608696 55 17 54.3 2 173 24 250 301 DAC81393.1 TPA_asm: PolB-C [Pimephales minnow adintovirus] diamond 636 54.7 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Pimephales minnow adintovirus
30580504 30580504 PRJNA385073_P_NODE_50073_length_246_cov_0.890173_g49911_i0 PRJNA385073 50073 246 0.890173 2.18982558 Adintovirus homo33 3115912 Viruses Viruses 102 2.0899999999999994e-23   NR DBA48451.1 3115912 g49911 i0 58 0.98780487804878 81 34 98.8 0 2 244 15 95 DBA48451.1 MAG TPA_asm: Hexon [Adintovirus homo3309] diamond 243 102 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Orthopolintovirales Adintoviridae   Adintovirus homo3309
31086281 31086281 PRJNA385073_P_NODE_43815_length_250_cov_0.870056_g43653_i0 PRJNA385073 43815 250 0.870056 2.17514 Mayetiola barley midge adintovirus 2609858 Viruses Viruses 68.6 3.12e-11   NR YP_010796966.1 2609858 g43653 i0 45.9 2.508 74 33 88.8 2 29 250 349 415 YP_010796966.1 PLA2X-adenain [Mayetiola barley midge adintovirus] diamond 627 68.6 1 Viruses   Bamfordvirae Preplasmiviricota Polintoviricetes Amphintovirales Eupolintoviridae Alphadintovirus Alphadintovirus mayetiola

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;